DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaAC45 and vha-19

DIOPT Version :9

Sequence 1:NP_610470.1 Gene:VhaAC45 / 35944 FlyBaseID:FBgn0262515 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_500332.1 Gene:vha-19 / 177103 WormBaseID:WBGene00021952 Length:451 Species:Caenorhabditis elegans


Alignment Length:468 Identity:102/468 - (21%)
Similarity:164/468 - (35%) Gaps:158/468 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VIGAAVAEQTPVFLWG-----------ANS-VAKPS----LKTVSQVEFAEQLAALLEDHMVVAF 59
            ::.:|.||:..||:..           ||: .::||    .|:|....|.|   :....|.:.|.
 Worm    36 LVESATAEEPVVFIVNPDFTLGQFSVKANAYTSEPSADYLAKSVKNSNFHE---SQYFSHQIEAT 97

  Fly    60 EENGLSSKDFLCSNSQAQSCYAQLQGVSPKTYYTSVENPSEALRSVAAKREHNSIDASGKLTTPA 124
            :...|||.|...:.|.....|.:        .:||:|..:|.|.|        .||.|       
 Worm    98 QAQWLSSADQYSAGSPIYIIYGE--------EWTSMEQLAEQLIS--------KIDNS------- 139

  Fly   125 KCAVGTALFVTFEDAAESREAS-----------LESHDAAIAAISKQFECKVAY------LYLAA 172
               ||   .:|..||....::|           .:|.::|.|..:..|...:..      .|...
 Worm   140 ---VG---IITSTDAVAHEKSSRVKRVATDEFNSDSENSAAAEANGGFPFPLVIPPYNQTFYSVK 198

  Fly   173 PS------------TAPVVQRRTRRDTAATTGGIMWKSTNQFQIFYTALLYNGNPIT----VTDL 221
            |:            |..|.|::.:                  .::|......|:..|    .||:
 Worm   199 PTNGHSCLFYLEGLTVVVEQKKEK------------------VLYYANAYIPGSNFTWAYSETDV 245

  Fly   222 KLTNSS----STKLSVVMDTSV---------------ADKPITFDVVYNG---GYFSLSNLVYDN 264
            ...|.:    ..|:.:.::..:               .|| |.||:.:.|   ||::|:..  ..
 Worm   246 TCPNGTIGDFIFKIHLTLENDITGMQGTSKKAFTMKKGDK-IDFDLTFTGDLFGYWALNKA--SA 307

  Fly   265 NNFRSSGVNAPTTFSYSCGNLTLESAAVNNMYNTLSFKSL---QLQAPFDGTYKEDFPFG----- 321
            :|...||.:...:.|.....:...||......|:::..||   |.||.|..|.::....|     
 Worm   308 SNLAISGYDPYKSASVDGSKVVNGSATQYTKLNSVAGWSLACGQSQAVFFPTNEQSVRIGVALMN 372

  Fly   322 -----------DSW-----------DCVGFVTPGILMGLFVVALLLV--IMFVGVCWMMDINTMD 362
                       :.|           ||.|..:.|..||: |.||:|:  :|| |...:..:.|||
 Worm   373 TQIQLFNYQNPEKWVESAHFTLQTEDCTGTFSSGSWMGI-VSALVLIAGLMF-GYVMLQSVQTMD 435

  Fly   363 RFDDPKGKTITIN 375
            ||||||.:.|.||
 Worm   436 RFDDPKQRQIVIN 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaAC45NP_610470.1 ATP-synt_S1 244..376 CDD:368630 48/167 (29%)
vha-19NP_500332.1 ATP-synt_S1 16..430 CDD:283484 90/448 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167275
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3868
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7773
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002234
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_129106
Panther 1 1.100 - - LDO PTHR12471
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4345
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.810

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