DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gnptab and Gnptab

DIOPT Version :10

Sequence 1:NP_610469.3 Gene:Gnptab / 35943 FlyBaseID:FBgn0033392 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001004164.2 Gene:Gnptab / 432486 MGIID:3643902 Length:1235 Species:Mus musculus


Alignment Length:998 Identity:240/998 - (24%)
Similarity:376/998 - (37%) Gaps:352/998 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RLRRRWPRRMRRAMEQLRLQSRRK--LLALTMTGGLCLAIWVVANYLSASEEGQTGGFSSACTAI 64
            :|:.:.|.::...::.|||.|...  ||.|....|.        ..|:...:..........|..
Mouse   242 QLKTKLPEKLSSKIKLLRLYSEASVALLKLNNPKGF--------QELNKQTKKNMTIDGKELTIS 298

  Fly    65 DAVYTWVNGSDPNFIEDIRRFDDKYDPSRFDDKNELRYSLRSLEKHAAWIRHVYIVTNGQIPSWL 129
            .|...|    |.:.|...:: |:....|||:|..||||||||:|:||.|:|:::|||||||||||
Mouse   299 PAYLLW----DLSAISQSKQ-DEDVSASRFEDNEELRYSLRSIERHAPWVRNIFIVTNGQIPSWL 358

  Fly   130 DLSYERVTVVPHEVLAPDPDQLPTFSSSAIETFLHRIPKLSKRFLYLNDDIFLGAPLYPEDLYTE 194
            :|...|||:|.|:.:..:...||||||.|||:.:|||..||::|:|||||:..|..::|:|.|:.
Mouse   359 NLDNPRVTIVTHQDIFQNLSHLPTFSSPAIESHIHRIEGLSQKFIYLNDDVMFGKDVWPDDFYSH 423

  Fly   195 AEGVRVYQAWMVPGCALDCPWTYIGDGACDRHCNIDACQFDGGDCS-------------ETG--- 243
            ::|.:||..|.||.||..||.::|.||.||:.||..||.:||||||             .||   
Mouse   424 SKGQKVYLTWPVPNCAEGCPGSWIKDGYCDKACNNSACDWDGGDCSGNTAGNRFVAGGGGTGNIG 488

  Fly   244 ------------------------------------------PASD------------------A 248
                                                      .|.|                  .
Mouse   489 AGQHWQFGGGINTISYCNQGCANSWLADKFCDQACNVLSCGFDAGDCGQDHFHELYKVTLLPNQT 553

  Fly   249 HVIPPSKEVLE---------------------VQPAAVPQ--SRVHRFPQMGL------------ 278
            |.:.|..|.|.                     ::.|::..  ..:|.....|:            
Mouse   554 HYVVPKGEYLSYFSFANIARRGVEGTYSDNPIIRHASIANKWKTIHLIMHSGMNATTIYFNLTLQ 618

  Fly   279 ---------------------------QKLFR----------RSSANFKDVMRHR---------- 296
                                       ||.:.          ::...|:||.:.:          
Mouse   619 NANDEEFKIQIAVEVDTREAPKLNSTTQKAYESLVSPVTPLPQADVPFEDVPKEKRFPKIRRHDV 683

  Fly   297 ---------------NVSTLKELRRI--------VER---------FNKAKLM----------SL 319
                           |:|.|.:..::        :||         .:|:.|:          .:
Mouse   684 NATGRFQEEVKIPRVNISLLPKEAQVRLSNLDLQLERGDITLKGYNLSKSALLRSFLGNSLDTKI 748

  Fly   320 NPE---------LETSSSEPQTTQRHG-------------------------------------- 337
            .|:         ||.....|...:.||                                      
Mouse   749 KPQARTDETKGNLEVPQENPSHRRPHGFAGEHRSERWTAPAETVTVKGRDHALNPPPVLETNARL 813

  Fly   338 ------------------------LRKED------------------------------------ 342
                                    |.||:                                    
Mouse   814 AQPTLGVTVSKENLSPLIVPPESHLPKEEESDRAEGNAVPVKELVPGRRLQQNYPGFLPWEKKKY 878

  Fly   343 -----------------FKSS-------TDIYSHSLIATNMLLNRAYGFKARHVLAHVGFLIDKD 383
                             |..|       .|.::.||...|.:||..:||.:|.|.||:..:||:.
Mouse   879 FQDLLDEEESLKTQLAYFTDSKHTGRQLKDTFADSLRYVNKILNSKFGFTSRKVPAHMPHMIDRI 943

  Fly   384 IVEAMQRRFHQQILDTAHQRFRAPTDLQYAFAYYSFLMSETKVMSVEEIFDEFDTDGSATWSDRE 448
            :::.:|..|.::...|:..:.|...|:|:||:|:.:|||..:.:::.::|.|.|||.|...||||
Mouse   944 VMQELQDMFPEEFDKTSFHKVRHSEDMQFAFSYFYYLMSAVQPLNISQVFHEVDTDQSGVLSDRE 1008

  Fly   449 VRTFLTRIYQPPLDWSAMRYFEEVVQNCTRNLGMHLKVDTVEHSTLVYERYEDSNLPTITRDLVV 513
            :||..|||:..||....:...|.::.||::.|..:  :..:.:.....|.|.|.|||.:|:.||.
Mouse  1009 IRTLATRIHDLPLSLQDLTGLEHMLINCSKMLPAN--ITQLNNIPPTQEAYYDPNLPPVTKSLVT 1071

  Fly   514 RCPLLAEALAANFAVRPKYNFHVSPKRTSHSNFMMLTSNLTEVVESLDRLRRNPRKFNCINDNLD 578
            .|..:.:.:...:..:.||.|.:..:  ....|.|:.:|::.||..||.:|:|||||.|:|||:|
Mouse  1072 NCKPVTDKIHKAYKDKNKYRFEIMGE--EEIAFKMIRTNVSHVVGQLDDIRKNPRKFVCLNDNID 1134

  Fly   579 ANRGEDNEMVRHLLEDFYLSFFPRRSKFELPPQYRNRFESWRDFQRWKR-RKRAVLVIGYGVSLL 642
            .|. :|...|:.:|.|||.|.||..|:||||.:|||||....:.|.|:. |.:........::.|
Mouse  1135 HNH-KDARTVKAVLRDFYESMFPIPSQFELPREYRNRFLHMHELQEWRAYRDKLKFWTHCVLATL 1198

  Fly   643 LVVCLLRFMCHHKAKLVRRCVQR 665
            ::..:..|.......|.|:...|
Mouse  1199 IIFTIFSFFAEQIIALKRKIFPR 1221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GnptabNP_610469.3 Stealth_CR1 64..90 CDD:465346 5/25 (20%)
Stealth_CR2 93..200 CDD:463267 58/106 (55%)
Notch 207..240 CDD:459658 18/32 (56%)
Stealth_CR3 374..422 CDD:465347 14/47 (30%)
Stealth_CR4 561..617 CDD:465348 31/55 (56%)
GnptabNP_001004164.2 Stealth_CR1 73..101 CDD:465346
RRM1_GNPTAB 137..225 CDD:410178
GlcNAc-1_reg 219..305 CDD:408237 12/64 (19%)
Stealth_CR2 322..429 CDD:463267 56/106 (53%)
Notch 436..469 CDD:459658 16/32 (50%)
LNR 1 438..473 17/34 (50%)
Notch 503..535 CDD:459658 8/82 (10%)
LNR 2 505..545 10/115 (9%)
DMAP_binding 699..811 CDD:368923 31/111 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 751..783 6/31 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 830..850 11/19 (58%)
Stealth_CR3 934..982 CDD:465347
Stealth_CR4 1117..1173 CDD:465348
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.