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Protein Alignment unpg and vsx2
DIOPT Version :9
| Sequence 1: | NP_477146.1 |
Gene: | unpg / 35942 |
FlyBaseID: | FBgn0015561 |
Length: | 485 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_005158862.1 |
Gene: | vsx2 / 796163 |
ZFINID: | ZDB-GENE-001222-1 |
Length: | 393 |
Species: | Danio rerio |
| Alignment Length: | 153 |
Identity: | 48/153 - (31%) |
| Similarity: | 69/153 - (45%) |
Gaps: | 22/153 - (14%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 259 ISLTMSPRNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQGNGSSSNSKSRRRR 323
:|.|:.|..:|.. .:|||:|.|..|...|: .....|...|.||.|
Zfish 125 LSRTVGPLEHNQS---------ASSDSDDVSSSERKMSK-----------SSLSQSKKRKKRRHR 169
Fly 324 TAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKW-KRVKAGLTSHGLG 387
|.|||.||.|||:.|:...|..:..|..:|...:|.|.::::||||||||| ||.|....|..:.
Zfish 170 TIFTSYQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMA 234
Fly 388 RNGTTSG-TKIVVPIPVHVNRFA 409
..|.... .:..:|:|..:.:.|
Zfish 235 EYGLYGAMVRHSIPLPESILKSA 257
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| unpg | NP_477146.1 |
Homeobox |
324..375 |
CDD:278475 |
24/51 (47%) |
| vsx2 | XP_005158862.1 |
Homeobox |
170..221 |
CDD:278475 |
23/50 (46%) |
| OAR |
338..355 |
CDD:281777 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
0 | 0.000 |
Not matched by this tool. |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
0 | 0.000 |
Not matched by this tool. |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
0 | 0.000 |
Not matched by this tool. |
| OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
| OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
| orthoMCL |
0 | 0.000 |
Not matched by this tool. |
| Panther |
0 | 0.000 |
Not matched by this tool. |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| RoundUp |
0 | 0.000 |
Not matched by this tool. |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
| ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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