DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and hoxa1a

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_571611.1 Gene:hoxa1a / 58051 ZFINID:ZDB-GENE-000823-5 Length:329 Species:Danio rerio


Alignment Length:307 Identity:82/307 - (26%)
Similarity:105/307 - (34%) Gaps:111/307 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 AQQPQAQAQPQPPPPHPPTHALEKQLPPTL-----PHPLDTRFLPFNPAAAGVAPTDLSYRRLAE 179
            :.|....:|||        .|...|.|.||     .||           :.|.......|...| 
Zfish    58 SSQDVINSQPQ--------QAGSYQSPGTLSITYSAHP-----------SYGTQSFCTGYNHYA- 102

  Fly   180 LMNQDYVHSLSV------------------HARLQHMAAAGRMH---------------EDQAN- 210
             :|||...|:|.                  |...:|..::|.:|               .|||| 
Zfish   103 -LNQDVESSVSFPQCGPLVYSGNISSTVVQHRHHRHGYSSGNVHLHGQFQYGSATYGNSSDQANL 166

  Fly   211 PGMAQLQEPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFECSGDSCSDISLTMSPRNYNGEMDKS 275
            ..:|....|..| .| .|......||:...:..|...|:                      |...
Zfish   167 TFVAGCSNPLSP-LH-VPHHDACCSPLSDGVPTGQTFDW----------------------MKVK 207

  Fly   276 RNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQGNGSSSNSKSRRRRTAFTSEQLLELEREFHA 340
            ||...|....|              .|.||:.:            ..||.|:::||.|||:|||.
Zfish   208 RNPPKTGKAGE--------------YGFGGQPN------------TVRTNFSTKQLTELEKEFHF 246

  Fly   341 KKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKW-KRVKAGLTSHGL 386
            .|||:...|.:||.||:|:|.||||||||||.|. ||.|.||....|
Zfish   247 NKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKEGLLPKSL 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 31/52 (60%)
hoxa1aNP_571611.1 Antp-type hexapeptide 200..205 1/26 (4%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 208..227 7/44 (16%)
Homeodomain 229..282 CDD:459649 32/52 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 277..329 8/17 (47%)

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