DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and hoxa4a

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_571610.1 Gene:hoxa4a / 58050 ZFINID:ZDB-GENE-000823-4 Length:245 Species:Danio rerio


Alignment Length:268 Identity:71/268 - (26%)
Similarity:109/268 - (40%) Gaps:55/268 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 LMNQDYVHSLSVHARLQH----MAAAGRMHEDQANPGMAQLQEPTPPQAHSSPAKSGSHSPMEPA 240
            |:|.:|:..........|    |..:...:|...:||....:|.:.|:::.              
Zfish     7 LINSNYIEPSFPPCEEYHQNGYMPVSSDYYERPKDPGFPHHEEASYPRSNY-------------- 57

  Fly   241 LDVGMDEDFECSGDSCSDISLTMSPRNYNGEMDKSRN-GAYTNSDS-------EDCSDDEGAQSR 297
                .::.::....|.:|:: ..|.|::......|:| |....::|       :|||....|.. 
Zfish    58 ----QEQSYDYGNVSTNDLN-DFSDRHHAQPQSVSQNHGPRLTTESCVGSDGNKDCSLVSDALP- 116

  Fly   298 HEGGGMGGKD------------SQGNGSSSNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERS 350
               |....|:            :....|.|....:|.|||:|.:|.||||:|||..:||:...|.
Zfish   117 ---GSQKSKEPVVYPWMKKVHVNTVTASYSGGVPKRSRTAYTRQQALELEKEFHFNRYLTRRRRV 178

  Fly   351 QIATSLKLSEVQVKIWFQNRRAKWKRVKAGLTSHGLGRNGTTSGTKIVVPIPVHVNRFAVRSQHQ 415
            :||.::.|||.||||||||||.|||:      .|.|......|.:.  .|...||...|.:.|..
Zfish   179 EIAHTMCLSERQVKIWFQNRRMKWKK------DHKLPNTKIRSSSS--APSNHHVKTDATQQQQT 235

  Fly   416 QLEKMCLS 423
            .|...|.|
Zfish   236 LLPTPCSS 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 30/50 (60%)
hoxa4aNP_571610.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..99 12/83 (14%)
Antp-type hexapeptide 126..131 0/4 (0%)
Homeobox 150..203 CDD:278475 31/52 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 205..245 11/41 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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