DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and barhl1a

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001017712.3 Gene:barhl1a / 550407 ZFINID:ZDB-GENE-050417-212 Length:299 Species:Danio rerio


Alignment Length:313 Identity:85/313 - (27%)
Similarity:130/313 - (41%) Gaps:74/313 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 SLSVHARLQHMAAAGRMHEDQANPGMAQLQEPTPPQAHSSPAK---SGSHSPMEP---------- 239
            |..:.:.|.|.|         ::|.|::.:..:|  |..||..   ||..||..|          
Zfish     8 SFGIESILSHRA---------SSPCMSKGECRSP--AELSPRSDLDSGCSSPPSPRRSSVEDAVH 61

  Fly   240 --ALDVGMDEDFECSGD---------------SCSDISLTMSPRNYNGEMDKSRNGAYTNSDSED 287
              |..:|:|...:.|..               .|..:: ..:|.:..|:         :..|:||
Zfish    62 RRARALGLDSPLQISQQPRTVTSSFLIRDILADCKPLA-ACAPYSSTGQ---------SAQDAED 116

  Fly   288 CSD----DEGAQSRHEGGGMGGKDSQGNGSSSNS---KSRRRRTAFTSEQLLELEREFHAKKYLS 345
            |.|    :..:.|.:.......::...:..|.||   |.|:.|||||..||.:|||.|..:||||
Zfish   117 CMDKLHSNSSSDSEYRVKDEADREISSSRDSPNSRLKKPRKARTAFTDHQLAQLERSFERQKYLS 181

  Fly   346 LTERSQIATSLKLSEVQVKIWFQNRRAKWKRVKA-GLTSHGLGRNGTTSGTKIVVPIPVHVNRFA 409
            :.:|.::|.||.|::.|||.|:||||.||||..| ||..  |...|..|..:.:.|.|.    |.
Zfish   182 VQDRMELAASLNLTDTQVKTWYQNRRTKWKRQTAVGLEL--LAEAGNYSALQRMFPSPY----FY 240

  Fly   410 VRSQHQQLEK---MCL----SGPKPDLRKKLSAEAIGGFEKFSGSTNASSPSG 455
            .:|....|:.   :.|    |.|.|.:::.|....:  .....|..:.:|.||
Zfish   241 PQSLVSNLDPGPGLYLYRGPSAPPPPVQRPLVPRIL--LHGLQGGGDPASLSG 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 29/51 (57%)
barhl1aNP_001017712.3 None

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