DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and pitx2

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001017227.1 Gene:pitx2 / 549981 XenbaseID:XB-GENE-482492 Length:345 Species:Xenopus tropicalis


Alignment Length:317 Identity:75/317 - (23%)
Similarity:120/317 - (37%) Gaps:85/317 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 VHSLSVHARLQH-----MAAAGRMHEDQANPGMAQLQEPTPPQAHSSPAKSGSHSPMEPALDVGM 245
            ::|:.....|.|     :|.|...|:...       |:....|.|........|...:|      
 Frog     1 MNSMKEPLHLDHLVGSKLATASSHHQHHH-------QQHQQHQHHHQQHHHQQHQQPQP------ 52

  Fly   246 DEDFECSGDSCSDISLTMSPRNYNGEMDKSRNGAYTNSDS---EDCSDDEGAQSRHEGGGMGGKD 307
                    .:.:.:|:..|....:||. |:|...:|.||:   |....|:..||::|       |
 Frog    53 --------QAVTLVSMASSLGQRSGEC-KARLEVHTISDTSSPEAADKDKSHQSKNE-------D 101

  Fly   308 SQGNGSSSNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRA 372
            |..:..|...:.||:||.|||:||.|||..|...:|..::.|.:||....|:|.:|::||:||||
 Frog   102 SSTDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRA 166

  Fly   373 KWKR----VKAGLTSHGLG-----------------------RNGTTSGTKIVVPIP----VHVN 406
            ||::    .:|.|..:|.|                       ..|.||.:......|    ::||
 Frog   167 KWRKRERNQQAELCKNGFGPQFNGLMQPYDDMYPSYSYNNWAAKGLTSASLSTKSFPFFNSMNVN 231

  Fly   407 RFAVRSQHQQLEKMCLSGPKPDLRKKLSAEAI---------GGFEKFSGSTNASSPS 454
            ..:.:|.        .|.|.......:|:..:         .|....:...|.|:||
 Frog   232 PLSSQSM--------FSSPNSISSMSMSSGMVPSAVTGVPGSGLNSLNNLNNLSNPS 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 24/50 (48%)
pitx2NP_001017227.1 XRCC4 <84..144 CDD:284132 22/66 (33%)
Homeobox 117..169 CDD:278475 25/51 (49%)
OAR 303..320 CDD:281777
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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