DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and pou2f1

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_012812406.1 Gene:pou2f1 / 549091 XenbaseID:XB-GENE-853992 Length:764 Species:Xenopus tropicalis


Alignment Length:440 Identity:96/440 - (21%)
Similarity:163/440 - (37%) Gaps:125/440 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PTTRLASKPFPKPFSIESLIANQT-------PATATPPSPPEERDQEQEAE-------------Q 62
            ||.  |.:|..:| |:::.|. ||       |.|....:|.:::...|:|:             |
 Frog   103 PTQ--AVQPSQQP-SLQAAIP-QTQLMVAGGPITGLTLTPAQQQLLLQQAQAQLLAAAVQHSASQ 163

  Fly    63 EQELSARAMVASSALGLTQFPLYNPWLHGYFAQNHERLTHLIAGGCYLPSSPAGHPAAQQPQAQA 127
            :...:...:.||:|..:||.||..|.   ..||:.::|..|                 ||.....
 Frog   164 QHSAAGATISASAATPMTQIPLSQPI---QIAQDLQQLQQL-----------------QQQNLNL 208

  Fly   128 QPQPPPPHPPTHALEKQLPPTLPHPLDTRFLPFNPAAAGVAPTDLSYRRLAELMNQDYVHSLSVH 192
            | |....||.|:     |||       .:|:        ::.|....:.|.:..|        :.
 Frog   209 Q-QFVLVHPTTN-----LPP-------AQFI--------ISQTPQGQQGLLQAQN--------LL 244

  Fly   193 ARLQHMAAAGRMHEDQANPGMAQLQEP---------TP----PQAHSSPAKSGSHSPMEPALDVG 244
            .:|...:.|..:   |:.|.:....:|         ||    ||:.::|.:..:.|..||: |:.
 Frog   245 TQLPQQSQANLL---QSQPSITLTSQPATPTRTIAATPVQQLPQSQTTPKRIDTPSLEEPS-DLE 305

  Fly   245 MDEDFECS--------GDSCSDISLTMSPRNYNGEMDK---SRNGAYTNSDSEDCS--------- 289
            ..|.|..:        |.:..|:.|.|. :.|..:..:   ||..|...|....|.         
 Frog   306 ELEQFAKTFKQRRIKLGFTQGDVGLAMG-KLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWL 369

  Fly   290 DD---EGAQSRHEGGGMGGKDSQGNGSSSNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQ 351
            :|   |...|..........:|.|:|....::.|::||:..:...:.||:.|...:..:..|.:.
 Frog   370 NDAVLENITSDSSLSNQSVLNSPGHGMEGLNRRRKKRTSIETNIRVALEKSFLENQKPTSEEITM 434

  Fly   352 IATSLKLSEVQVKIWFQNRRAKWKRVKAGLTSHGLGRNGTTSGTKIVVPI 401
            ||..|.:.:..:::||.|||.|.||:           |..:||.....||
 Frog   435 IADQLNMEKEVIRVWFCNRRQKEKRI-----------NPPSSGGSSSSPI 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 14/50 (28%)
pou2f1XP_012812406.1 POU 299..372 CDD:197673 15/74 (20%)
COG5576 <384..503 CDD:227863 26/101 (26%)
Homeobox 405..459 CDD:395001 15/53 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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