DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and Hoxb6

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_006247294.1 Gene:Hoxb6 / 497986 RGDID:1562142 Length:224 Species:Rattus norvegicus


Alignment Length:179 Identity:58/179 - (32%)
Similarity:75/179 - (41%) Gaps:41/179 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 PTPPQ----AHSS--PAKSGSHSPMEPALDVGMDEDFECSGDSCSDISLTMSPRNYNGEMDKSRN 277
            |.|.|    |.||  |...|.:....|. |.|....|....|:...:|....|..::.|..||  
  Rat    45 PGPGQDKGFAASSYYPPAGGGYGRAAPC-DYGPAPAFYREKDAACALSGADEPPPFHPEPRKS-- 106

  Fly   278 GAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQG---------------NGSSSNSKSRRRRTAFT 327
                     ||:.|:..        .|..:.|.               |.||.....||.|..:|
  Rat   107 ---------DCAQDKSV--------FGETEEQKCSTPVYPWMQRMNSCNSSSFGPSGRRGRQTYT 154

  Fly   328 SEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKR 376
            ..|.||||:|||..:||:...|.:||.:|.|:|.|:||||||||.|||:
  Rat   155 RYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 27/50 (54%)
Hoxb6XP_006247294.1 Homeobox 150..203 CDD:395001 29/52 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X14
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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