DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and Abd-B

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001303472.1 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster


Alignment Length:491 Identity:108/491 - (21%)
Similarity:171/491 - (34%) Gaps:157/491 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 EERDQEQEAEQEQELSARAMVASSALGLTQFPL----YNPWLHGYFAQNHERLTHLIAGGCYLPS 112
            :::.|||:..|||:...:.:...:...|.| ||    ::...|.:..|..::..|.:.       
  Fly    12 QQQQQEQQHLQEQQQHLQQLHHHAHHHLPQ-PLHTTSHHHSAHPHLQQQQQQQQHAVV------- 68

  Fly   113 SPAGHPAAQQPQAQAQPQPPPPHPPTHALEKQLPPTLP-HPLDTRFLP----------------- 159
              |..|::...|.|.|..|.....||||:..:.||.:| ..:..:.||                 
  Fly    69 --ASSPSSVLQQQQQQSTPTTHSTPTHAVMYEDPPPVPLVAVQQQHLPAPQQQQQLQQQQQQQQQ 131

  Fly   160 ---FNPAAAGVAPTDLSYRRLAELMNQDYVHSLSVH------ARLQHMAAAG-----RMHEDQAN 210
               ..|.|..::|........|    |...|..|.|      .:..:..|:|     :..:.|.|
  Fly   132 QLATTPVAGALSPAQTPTGPSA----QQQQHLTSPHHQQLPQQQTPNSVASGASSNLQQQQQQQN 192

  Fly   211 ----PGMAQLQEPTPPQAHSSPAKSGSH----------SPME-PALDVGMDEDFECSGDSCSDIS 260
                ||..|:..||  .|..||:...|.          :|:. ||:..|  ..||.  |:.:.:.
  Fly   193 AAVAPGQTQIVAPT--TASVSPSSVSSQKEDINMSIQLAPLHIPAIRAG--PGFET--DTSAAVK 251

  Fly   261 LTMSPRNYN----------GEMDKSRNGAYTNSDSE-------------DCSDDEGAQS------ 296
            ...:...||          |..|:....||...:::             |.:....|.:      
  Fly   252 RHTAHWAYNDEGFNQHYGSGYYDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAAYMNEA 316

  Fly   297 -RH---------EG--------------GGMGGKDSQGNGSSSNS-------------------- 317
             ||         ||              ||:.|..|:...||..|                    
  Fly   317 ERHVSAAARQSVEGTSTSSYEPPTYSSPGGLRGYPSENYSSSGASGGLSVGAVGPCTPNPGLHEW 381

  Fly   318 ----KSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRVK 378
                ..|::|..::..|.||||:||....|:|..:|.::|.:|:|:|.||||||||||.|.|:..
  Fly   382 TGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNS 446

  Fly   379 AGLTSHGLGRNGTTSGTKIVVPIPVHVNRFAVRSQH 414
            ....:.....|.::|.         |.:..|.:..|
  Fly   447 QRQANQQNNNNNSSSN---------HNHAQATQQHH 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 25/50 (50%)
Abd-BNP_001303472.1 Homeobox 390..443 CDD:278475 26/52 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.000

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