DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and nkx6.1

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001002475.1 Gene:nkx6.1 / 436748 ZFINID:ZDB-GENE-040718-178 Length:312 Species:Danio rerio


Alignment Length:268 Identity:66/268 - (24%)
Similarity:104/268 - (38%) Gaps:68/268 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 PPHPPTHALEKQLPPTLP-HPLDTRFLPFNPAAAGVAPTDLSYRRLAELMNQDYVHS---LSVHA 193
            ||....|::.:...|..| :||.:.    .||:: .:||..|.......::...:.:   ||..|
Zfish    20 PPLAALHSMTEMKTPLYPAYPLSST----GPASS-TSPTATSPNPGGIPVSSPGIKTSSGLSALA 79

  Fly   194 RLQHMAAA--GRMHEDQANPGMA--------------QLQEPTPPQAHSSPAKSGSHSPMEPALD 242
            ..|..|.|  ..:::..:.|.:|              .|..|.||..:.||:.:.......|.  
Zfish    80 SAQQCAIATPHGINDILSRPSVACSPAGILSGLPRFSSLSPPPPPGLYFSPSAAAVAVARYPK-- 142

  Fly   243 VGMDEDFECSGDSCSDISLT----MSPRNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGM 303
                             .||    .:|..:.|.|           .|....|...|.|.|:...:
Zfish   143 -----------------PLTELPGRTPIFWPGVM-----------QSPHWRDARFACSPHQNSVL 179

  Fly   304 GGKDSQGNGSSSNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQ 368
            ..||         .|.:..|..|:.:|:..||:.|...|||:..||:::|.||.::|.|||:|||
Zfish   180 LDKD---------GKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQ 235

  Fly   369 NRRAKWKR 376
            |||.||::
Zfish   236 NRRTKWRK 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 24/50 (48%)
nkx6.1NP_001002475.1 Homeobox 189..242 CDD:278475 25/52 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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