DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unpg and abd-A

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster


Alignment Length:594 Identity:121/594 - (20%)
Similarity:185/594 - (31%) Gaps:222/594 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 TATPPSPPEERDQEQEAEQEQELSARAMVASSALGLTQFPLYNPWLHGYFAQNHERLTHLIAG-- 106
            |.|||:       ...|.....|:|.|..||:::..:             :.::...::.|||  
  Fly    26 TTTPPN-------SSSAAVAAALAAAAASASASVSAS-------------SSSNNNSSNTIAGSN 70

  Fly   107 ------GCYLPSSPAGHPA-------AQQPQAQAQPQPPPPHPPTHALEKQLPPTLPHPLDTRFL 158
                  ....|||.:.:.:       :..|...:|.....||.|..:..                
  Fly    71 TSNTNNSSSSPSSSSNNNSNLNLSGGSLSPSHLSQHLGQSPHSPVSSSS---------------- 119

  Fly   159 PFNPAAAGVAPTDLSYRRLAELMNQDYVHSLSVHARLQHMAAAGRMHEDQ-----------ANPG 212
            ||......|....|::::...|.:|...|    |.:...::||.::.:.|           |:.|
  Fly   120 PFQQHHPQVQQQHLNHQQQQHLHHQQQQH----HHQYSSLSAALQLQQQQHHISKLAAAAVASHG 180

  Fly   213 MAQLQ-EPTPPQAHSSPAKSGSHSPMEPA-----LDVGMDEDFECSGDSCSDISLTMS------- 264
            .|..| ..|||.|.:|.|...|.||...|     |...::::...|..:.:..|...|       
  Fly   181 HAHQQLLLTPPSAGNSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASASASASAASSVAAAAAA 245

  Fly   265 -----------------------PRNYNGEMDKSRNGAYTNSDSEDCS----------------- 289
                                   |.::.|   .|....:|..:.:.||                 
  Fly   246 AAAAASSSFAIPTSKMYPYVSNHPSSHGG---LSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPA 307

  Fly   290 --------------DDEGAQSRHEGGGMGGKDSQGNG---------------------------- 312
                          ....|.|....|.: |.||.||.                            
  Fly   308 SASAQFAQFYQHATAAASAVSAASAGAI-GVDSLGNACTQPASGVMPGAGGAGGAGIADLPRYPW 371

  Fly   313 -------------------SSSNSKSRRR-RTAFTSEQLLELEREFHAKKYLSLTERSQIATSLK 357
                               :..|...||| |..:|..|.||||:|||...||:...|.:||.:|.
  Fly   372 MTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALC 436

  Fly   358 LSEVQVKIWFQNRRAKWK---------------------RVKAGLTSHGLGRNGTTSGTKIVVPI 401
            |:|.|:||||||||.|.|                     ::||..|.....:|......:    .
  Fly   437 LTERQIKIWFQNRRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKSAQQNKQVQQQQ----Q 497

  Fly   402 PVHVNRFAVRSQHQQLEKMCLSGPKPDLRKKLSAEAIGGFEKFSGSTNASSPSGGPVGLGVGVGV 466
            .....:...:.||||.::      :|.....:.|...|.........|...     :|||:||||
  Fly   498 QQQQQQQQQQQQHQQQQQ------QPQDHHSIIAHNPGHLHHSVVGQNDLK-----LGLGMGVGV 551

  Fly   467 GV-GVGLGV 474
            || |:|.|:
  Fly   552 GVGGIGPGI 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 27/50 (54%)
abd-ANP_732176.1 Homeobox 402..454 CDD:278475 28/51 (55%)
Abdominal-A 456..478 CDD:289192 0/21 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 1 0.900 - - E2759_KOG0489
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.810

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