DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and pb

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster


Alignment Length:197 Identity:62/197 - (31%)
Similarity:83/197 - (42%) Gaps:40/197 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 KDSQGNGSSSNSKS---------RRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEV 361
            |.|..|....||.:         ||.|||:|:.||||||:|||..|||....|.:||.||.|:|.
  Fly   176 KSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTER 240

  Fly   362 QVKIWFQNRRAKWKRVKAGLTSHGLGRNGTTSGTKIVVPIPVHVNRFAVRSQHQQLE------KM 420
            |||:||||||.|.||.....|..                   ..|:.:::....|.:      |.
  Fly   241 QVKVWFQNRRMKHKRQTLSKTDD-------------------EDNKDSLKGDDDQSDSNSNSKKS 286

  Fly   421 CLSG---PKPDLRKKLSAEAIGGFEKFSGSTNASSPSGGPVGLGVGVGVGVGVGLGVSTPLSLAR 482
            | .|   |..|:....|...  |....:.|...::||.|.:.....:..|:...|..||.:|.:.
  Fly   287 C-QGCELPSDDIPDSTSNSR--GHNNNTPSATNNNPSAGNLTPNSSLETGISSNLMGSTTVSASN 348

  Fly   483 SI 484
            .|
  Fly   349 VI 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 32/51 (63%)
pbNP_476669.3 Homeodomain 199..255 CDD:459649 35/55 (64%)

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