DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unpg and toe

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster


Alignment Length:540 Identity:127/540 - (23%)
Similarity:172/540 - (31%) Gaps:222/540 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLQNGEI----GTMESPTTRLASKPFPKPFSIESLIANQTPATATPPSPPEERDQEQEAEQEQEL 66
            |.|.|.:    ||:..|                .||....|..|||                   
  Fly   154 LSQQGAVSKLLGTLRPP----------------GLIGGSKPKVATP------------------- 183

  Fly    67 SARAMVASSALGLTQFPLYNPWLHGYFAQNHERLTHLIAGGCYLPSSP-------------AGHP 118
                .|.|.   :.|:...||.:..:  :..|||  :..|.|...::|             |...
  Fly   184 ----TVVSK---IEQYKRENPTIFAW--EIRERL--ITEGVCTNATAPSVSSINRILRNRAAERA 237

  Fly   119 AAQQPQAQAQP---QPPPPHPPTHALEKQLPPTLP--HPLDTRFLPFNPAAAGVAPTDLSYRRLA 178
            ||:..:|.:..   .|..|||.|..      ||.|  |||           .|..|       ||
  Fly   238 AAEFARAASYGYAIHPTHPHPYTSF------PTWPAHHPL-----------WGAVP-------LA 278

  Fly   179 ELMNQDYVHSLSVHARLQHMAAAGRMHEDQANPGMAQLQEPTPPQAHSSPAKSGSHSPMEPALDV 243
                                                     |||  ...||.:|.      ||..
  Fly   279 -----------------------------------------TPP--GGGPAGAGG------ALQP 294

  Fly   244 GMDEDFECSGDSC-SDISLTMSPRNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSR-------HEG 300
            |      .||.|. ||.:::.:|.:.|.....| ||..|||.| .|.|......|       .:.
  Fly   295 G------GSGSSYGSDGNMSSNPNSSNSNTTHS-NGHNTNSGS-GCGDSSAGSGRLSLPALSPDS 351

  Fly   301 GG---------------MGGKDSQGNGSSSNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERS 350
            |.               :.|:||:.. .|...|.||.||.|:.|||.|||:||....|..:..|.
  Fly   352 GSRDSRSPDADANRMIDIEGEDSESQ-DSDQPKFRRNRTTFSPEQLDELEKEFDKSHYPCVNTRE 415

  Fly   351 QIATSLKLSEVQVKIWFQNRRAKWKR-VKAGLTSHGLGRNGTTSGTKIV---------VPIPVHV 405
            ::|....|||.:|::||.||||||:| .:..|.......:.::|.|.:|         :|:||.|
  Fly   416 KLAARTALSEARVQVWFSNRRAKWRRHQRVNLIKQRDSPSTSSSPTPLVNPVVSPVSPIPVPVPV 480

  Fly   406 NRFAVRSQHQQLE-------KMC-----LSGPKPDLRKKLSAEAIGGFEKFSGSTN--------- 449
               ||....||.:       .||     .|..:|       ...|....|.|..|:         
  Fly   481 ---AVPESGQQKQPYPYSTSNMCNTSSSSSNSQP-------CNTINPGSKMSSKTSSVSSNQHME 535

  Fly   450 --------ASSPSGGPVGLG 461
                    ||..:..|:.:|
  Fly   536 EPAAAVATASPTASAPLSMG 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 24/50 (48%)
toeNP_524041.2 HTH 134..230 CDD:304362 23/121 (19%)
Homeobox 388..440 CDD:278475 25/51 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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