Protein Alignment unpg and Hoxc9

DIOPT Version :10

• Sequence 1: NP_477146.1
• Gene: unpg / 35942
• FlyBaseID: FBgn0015561
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: NP_001094377.1
• Gene: Hoxc9 / 368178
• RGDID: 1595784
• Length: 260
• Species: Rattus norvegicus
• Alignment Length: 307
• Identity: 75/307 - (24%)
• Similarity: 112/307 - (36%)
• Gaps: 62/307 - (20%)

  Fly    75 SALGLTQFPLYNPWLHGYFAQNHERLTHLIAGGCYLPSSPAGHPAAQQPQA---QAQPQPPPPHP 136
            ||.|    |:.|.::....:.::|.|.     ....|::.| ||||.:|..   .....|.....
  Rat     2 SATG----PISNYYVDSLISHDNEDLL-----ASRFPATGA-HPAAARPSGLVPDCSDFPSCSFA 56

  Fly   137 PTHALEKQLPPTLPHPLDTRFLPFNPAAAGVAPTDLSYRRLAELMNQDYVHSLSVHARLQHMAAA 201
            |..|:.......:|......:.|:.|.                                .|:.|.
  Rat    57 PKPAVFSTSWAPVPSQSSVVYHPYGPQ--------------------------------PHLGAD 89

  Fly   202 GRMHEDQANPGMAQLQEPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFECS-GDSCSDISLTMSP 265
            .|.......|....:..|      |.|| .|.|..::|....|...|  |. ||..|      .|
  Rat    90 TRYMRTWLEPLSGAVSFP------SFPA-GGRHYALKPDAYPGRRAD--CGPGDGRS------YP 139

  Fly   266 RNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQGNGSSSNSKSRRRRTAFTSEQ 330
            ....|...:.|:.|.....|.:.....|::.:.|...:...:...|...:.| :|::|..:|..|
  Rat   140 DYMYGSPGELRDRAPQTLPSPEADALAGSKHKEEKADLDPSNPVANWIHARS-TRKKRCPYTKYQ 203

  Fly   331 LLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRV 377
            .||||:||....||:...|.::|..|.|:|.||||||||||.|.|::
  Rat   204 TLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKKM 250

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
unpg	NP_477146.1	Homeodomain	324..376	CDD:459649	26/51 (51%)
Hoxc9	NP_001094377.1	Hox9_act	1..179	CDD:461369	44/233 (19%)
		Homeodomain	193..241	CDD:459649	22/47 (47%)