DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and VSX2

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_878314.1 Gene:VSX2 / 338917 HGNCID:1975 Length:361 Species:Homo sapiens


Alignment Length:253 Identity:66/253 - (26%)
Similarity:98/253 - (38%) Gaps:70/253 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 PPQAHSSPAKSG--------SHSPMEPA----------------------LDVGMDEDFECSGDS 255
            ||.:|...|..|        :.|.:.||                      |:|..|..       
Human    44 PPSSHPRAALDGLAPGHLLAARSVLSPAGVGGMGLLGPGGLPGFYTQPTFLEVLSDPQ------- 101

  Fly   256 CSDISLTMSP-RNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQGNGSSSNSKS 319
                |:.:.| ...:|.:|.|:.   .:|||||.|..:...|:           .....:...|.
Human   102 ----SVHLQPLGRASGPLDTSQT---ASSDSEDVSSSDRKMSK-----------SALNQTKKRKK 148

  Fly   320 RRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKW-KRVKAGLTS 383
            ||.||.|||.||.|||:.|:...|..:..|..:|...:|.|.::::||||||||| ||.|....|
Human   149 RRHRTIFTSYQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRS 213

  Fly   384 HGLGRNGTTSG-TKIVVPIPVHVNRFA-----------VRSQHQQ-LEKMCLSGPKPD 428
            ..:...|.... .:..:|:|..:.:.|           :...|:: ||....||.||:
Human   214 SVMAEYGLYGAMVRHSIPLPESILKSAKDGIMDSCAPWLLGMHKKSLEAAAESGRKPE 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 24/51 (47%)
VSX2NP_878314.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 104..151 13/60 (22%)
Homeobox 153..205 CDD:395001 24/51 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 262..300 4/10 (40%)
OAR 300..318 CDD:397759
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 304..317
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 313..361
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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