DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unpg and Gsc

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001137762.2 Gene:Gsc / 33240 FlyBaseID:FBgn0010323 Length:473 Species:Drosophila melanogaster


Alignment Length:504 Identity:114/504 - (22%)
Similarity:173/504 - (34%) Gaps:147/504 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 TMESPTTRLASKPFPKPFSIESLIANQTPATATPPSPPE--------------------ERDQEQ 58
            |..:|:|.....|....|.|..:   .||:.:.||:||.                    :|....
  Fly    16 TTTTPSTTPDIPPSKAKFKITVV---STPSPSPPPTPPPAGSMLAQMVETNSPPAGYTLKRSPSD 77

  Fly    59 EAEQEQ---ELSARAMVASSALGLTQFPLYNPWLHGYFAQNHERLTHLIAGGCYLPSSPAGHPAA 120
            ..||:|   ::| |:...::|..||...|.|....||..|   ||..::         ...|...
  Fly    78 LGEQQQPPRQIS-RSPGNTAAYHLTTAMLLNSQQCGYLGQ---RLQSVL---------QQQHAQH 129

  Fly   121 QQPQAQAQPQPPPPHPPTHALEKQLPP--------TLPHPLDTRFLPFNPAAAGVAPTDLSYRRL 177
            ||.|:|..............||::...        |:...|.:|     ....|.||:..|:  :
  Fly   130 QQSQSQTPSSDDGSQSGVTILEEERRGGAAAASLFTIDSILGSR-----QQGGGTAPSQGSH--I 187

  Fly   178 AELMNQDYVHSLSVHARLQHMAAAGRMHEDQANPGMAQLQEPTPPQAHSSPAKSGSHSPM----- 237
            :...||:.:.|..:...|:...|                :.|..|.::||  .|.:.||:     
  Fly   188 SSNGNQNGLTSNGISLGLKRSGA----------------ESPASPNSNSS--SSAAASPIRPQRV 234

  Fly   238 -----EPALDVGMDEDFECSGDSCSDISLTMSPRNY--------------NGEMDKSRNGAYTNS 283
                 .|.|.:|.......||.:.|.....::..|:              ..:|....:||....
  Fly   235 PAMLQHPGLHLGHLAAAAASGFAASPSDFLVAYPNFYPNYMHAAAVAHVAAAQMQAHVSGAAAGL 299

  Fly   284 DSEDCSDDEGAQSRHEGG------------GMGGKDSQGNGSSSNSKSRRRRTAFTSEQLLELER 336
            ..      .|....|..|            |.......|:|.....| ||.||.||.|||.:||.
  Fly   300 SG------HGHHPHHPHGHPHHPHLGAHHHGQHHLSHLGHGPPPKRK-RRHRTIFTEEQLEQLEA 357

  Fly   337 EFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRVK--------------AGLTSHGL- 386
            .|....|..:..|.|:|..:.|.|.:|::||:||||||::.|              .|.|::|. 
  Fly   358 TFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKWRKQKREEQERLRKLQEEQCGSTTNGTT 422

  Fly   387 -GRNGTTSGT---KIVVPIP---------VHV----NRFAVRSQHQQLE 418
             ..:||||.|   .:.|..|         ||:    |.::...:...||
  Fly   423 NSSSGTTSSTGNGSLTVKCPGSDHYSAQLVHIKSDPNGYSDADESSDLE 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 23/50 (46%)
GscNP_001137762.2 Homeobox 343..396 CDD:278475 24/52 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I3555
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.000

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