DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unpg and al

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster


Alignment Length:319 Identity:81/319 - (25%)
Similarity:118/319 - (36%) Gaps:96/319 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 LSVHARLQHMAAAGRMHEDQANPGMAQLQEPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFECSG 253
            :|...:|:.:....::    |:|....|.:..|   .||.|.:|:      ||.|.|        
  Fly     3 ISEEIKLEELPQEAKL----AHPDAVVLVDRAP---GSSAASAGA------ALTVSM-------- 46

  Fly   254 DSCSDISLTMSPRNYNGEMDKSRNGAY--TNS----DSEDCSDDEGAQSRHEGGGMGGKDSQGNG 312
                         :.:|......:||.  |||    .:.||..||.|..|               
  Fly    47 -------------SVSGGAPSGASGASGGTNSPVSDGNSDCEADEYAPKR--------------- 83

  Fly   313 SSSNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKW-KR 376
                 |.||.||.|||.||.|||:.|....|..:..|.::|..:.|:|.::::||||||||| |:
  Fly    84 -----KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQ 143

  Fly   377 VKAGLTSHG----LGRNGTTSGTKIVVPIP----VHV--------------NRFAVRSQHQQLEK 419
            .|.|..||.    |.....|..|.:...:|    .|:              |..|.|..|.....
  Fly   144 EKVGPQSHPYNPYLPGGAATMQTVVGAALPPNPFTHLGFQLRKPFDAQHAANLAAFRYPHLSAAP 208

  Fly   420 MCLSGPKPDLRK---KLSAEAIGGFEKFSGSTNASS--------PSGGPVGLGVGVGVG 467
            |..||.....::   .:....:.|.  :|.|::..|        |.|.|:|....:.||
  Fly   209 MIPSGYFNQFQRAPPHMLPHGMAGM--YSPSSSFQSLLANMTAVPRGTPLGKPPALLVG 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 24/52 (46%)
alNP_722629.1 Homeodomain 86..142 CDD:459649 27/55 (49%)
OAR 374..391 CDD:461067
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.