DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unpg and al

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster


Alignment Length:319 Identity:81/319 - (25%)
Similarity:118/319 - (36%) Gaps:96/319 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 LSVHARLQHMAAAGRMHEDQANPGMAQLQEPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFECSG 253
            :|...:|:.:....::    |:|....|.:..|   .||.|.:|:      ||.|.|        
  Fly     3 ISEEIKLEELPQEAKL----AHPDAVVLVDRAP---GSSAASAGA------ALTVSM-------- 46

  Fly   254 DSCSDISLTMSPRNYNGEMDKSRNGAY--TNS----DSEDCSDDEGAQSRHEGGGMGGKDSQGNG 312
                         :.:|......:||.  |||    .:.||..||.|..|               
  Fly    47 -------------SVSGGAPSGASGASGGTNSPVSDGNSDCEADEYAPKR--------------- 83

  Fly   313 SSSNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKW-KR 376
                 |.||.||.|||.||.|||:.|....|..:..|.::|..:.|:|.::::||||||||| |:
  Fly    84 -----KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQ 143

  Fly   377 VKAGLTSHG----LGRNGTTSGTKIVVPIP----VHV--------------NRFAVRSQHQQLEK 419
            .|.|..||.    |.....|..|.:...:|    .|:              |..|.|..|.....
  Fly   144 EKVGPQSHPYNPYLPGGAATMQTVVGAALPPNPFTHLGFQLRKPFDAQHAANLAAFRYPHLSAAP 208

  Fly   420 MCLSGPKPDLRK---KLSAEAIGGFEKFSGSTNASS--------PSGGPVGLGVGVGVG 467
            |..||.....::   .:....:.|.  :|.|::..|        |.|.|:|....:.||
  Fly   209 MIPSGYFNQFQRAPPHMLPHGMAGM--YSPSSSFQSLLANMTAVPRGTPLGKPPALLVG 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 24/51 (47%)
alNP_722629.1 Homeobox 89..141 CDD:278475 24/51 (47%)
OAR 374..391 CDD:281777
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I3555
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.910

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