DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unpg and HOXD10

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_002139.2 Gene:HOXD10 / 3236 HGNCID:5133 Length:340 Species:Homo sapiens


Alignment Length:371 Identity:89/371 - (23%)
Similarity:146/371 - (39%) Gaps:69/371 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SKPFPKPFSIESLIA-----NQTPATATPPSPPEERDQEQEAEQEQEL---SARAMVASSALGLT 80
            |.|....|.::|||:     :...::|:...||...|......|...|   .|:..|....:|:.
Human     6 SSPAANTFLVDSLISACRSDSFYSSSASMYMPPPSADMGTYGMQTCGLLPSLAKREVNHQNMGMN 70

  Fly    81 QFPLYNPWLHGYFAQNHERLTHLIAGGCYLPSSPAGHPAAQQPQAQAQPQPPPPHPPTHALEKQL 145
            ..| |.|.:..:...|.         .|.:          :||..|   |.|.....|:..|:. 
Human    71 VHP-YIPQVDSWTDPNR---------SCRI----------EQPVTQ---QVPTCSFTTNIKEES- 111

  Fly   146 PPTLPHPLDTRFLPFNPAAAGVAPTDLSYRRL----AELMNQDYVHSLSVHARLQHMAAAGRMHE 206
              ......|.|    |...:...|   ||:||    ..:.|.:.  .:..:.||....|.|:..|
Human   112 --NCCMYSDKR----NKLISAEVP---SYQRLVPESCPVENPEV--PVPGYFRLSQTYATGKTQE 165

  Fly   207 DQANP-GMAQLQEPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFECSGDSCSDISLTMSPRNYNG 270
            ...:| |.:.:.....|:..:.|..|.:...||..::..:      ||...:.:|...||....|
Human   166 YNNSPEGSSTVMLQLNPRGAAKPQLSAAQLQMEKKMNEPV------SGQEPTKVSQVESPEAKGG 224

  Fly   271 EMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQGNGSSSN---SKS-RRRRTAFTSEQL 331
            ..::....|..:..|.:..:.|..:           :.:.:..:||   :|| |::|..:|..|.
Human   225 LPEERSCLAEVSVSSPEVQEKESKE-----------EIKSDTPTSNWLTAKSGRKKRCPYTKHQT 278

  Fly   332 LELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRV 377
            ||||:||....||:...|.:|:.|:.|::.||||||||||.|.|::
Human   279 LELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKM 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 25/50 (50%)
HOXD10NP_002139.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 200..268 13/84 (15%)
Homeobox 269..323 CDD:395001 26/53 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.