DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and HOXD3

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_008829.3 Gene:HOXD3 / 3232 HGNCID:5137 Length:432 Species:Homo sapiens


Alignment Length:512 Identity:115/512 - (22%)
Similarity:161/512 - (31%) Gaps:209/512 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MERPALLQN----GEIGTMESPTT---RLASKPFPKPFSIESLIANQTPATATPPSPPEERDQEQ 58
            |::.|..:|    |..|..::..|   ....:|:|.|.:..||..:. |.:|             
Human    17 MQKAAYYENPGLFGGYGYSKTTDTYGYSTPHQPYPPPAAASSLDTDY-PGSA------------- 67

  Fly    59 EAEQEQELSARAMVASSALGLTQFPLYNPWLHGYFAQNHERLTHLIAGGCYLP---SSPAGHPAA 120
                       ..:.|||      ||..|...|  |:        :.|.|..|   :|..|...:
Human    68 -----------CSIQSSA------PLRAPAHKG--AE--------LNGSCMRPGTGNSQGGGGGS 105

  Fly   121 QQPQAQAQPQPPPPHPPTHALEKQLPPTLPHPLDTRFLPFNPAAAGVAPTDLSYRRLAELMNQDY 185
            |.|...::.|||.|.||        |||||        |.:|                       
Human   106 QPPGLNSEQQPPQPPPP--------PPTLP--------PSSP----------------------- 131

  Fly   186 VHSLSVHARLQHMAAAGRMHEDQANPGMAQLQEPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFE 250
                                   .|||            ...|||...                 
Human   132 -----------------------TNPG------------GGVPAKKPK----------------- 144

  Fly   251 CSGDSCSDISLTMSPRNYNGEMDKSRNGAYTNS---DSEDCSDDEGAQSRHEGGGMGGKDSQGNG 312
             .|.:.|..|.|:|.:.:....:..:|....||   ..|.|.|.                     
Human   145 -GGPNASSSSATISKQIFPWMKESRQNSKQKNSCATAGESCEDK--------------------- 187

  Fly   313 SSSNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWK-- 375
            |.....|:|.|||:||.||:|||:|||..:||....|.::|..|.|:|.|:||||||||.|:|  
Human   188 SPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKD 252

  Fly   376 -RVKAGLTSHGL----------GRNGTTSGTKIVVPIP--------------VHVNRFAVRSQHQ 415
             :.|..|.|...          |..|..:.:..:.|:|              ...|.:.:.:...
Human   253 QKAKGILHSPASQSPERSPPLGGAAGHVAYSGQLPPVPGLAYDAPSPPAFAKSQPNMYGLAAYTA 317

  Fly   416 QLEKMCLSGPK----PDLRKKLSAEAIGGF--EKFSGS--------TNASSPSGGPV 458
            .|.. ||...|    |:......|...|||  ....||        ..:.:|:.|||
Human   318 PLSS-CLPQQKRYAAPEFEPHPMASNGGGFASANLQGSPVYVGGNFVESMAPASGPV 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 29/50 (58%)
HOXD3NP_008829.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..62 5/18 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..197 47/257 (18%)
Antp-type hexapeptide 160..165 0/4 (0%)
Homeobox 198..250 CDD:306543 30/51 (59%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 253..280 5/26 (19%)
DUF4074 369..430 CDD:315871 3/5 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..432
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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