DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and Vsx1

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001284898.1 Gene:Vsx1 / 31470 FlyBaseID:FBgn0263511 Length:837 Species:Drosophila melanogaster


Alignment Length:583 Identity:120/583 - (20%)
Similarity:192/583 - (32%) Gaps:215/583 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PFSIESLI---ANQTPATAT------PPSP--------------------------PEERDQEQE 59
            ||:|:.::   |.|..|||:      ||||                          .:::.|:|:
  Fly     9 PFAIQEILGLGAYQQQATASATPSEAPPSPAATPPPTANTPANGSLSAVQQQQQQQQQQQQQQQQ 73

  Fly    60 AEQEQE------------------LSARAMVASSALGLTQFPLYNPWLHGYFAQNHERLTHLIAG 106
            .:|:|:                  |||.|..|::|....|.|::||             .:..|.
  Fly    74 LQQQQQQAIDSLRESRSISPDVSRLSAAAAAAAAAAAHCQLPVFNP-------------ANFYAA 125

  Fly   107 GCYLPSSPAGHPAAQQPQAQAQPQPPPPHPPTHA----LEKQLPP--TLPHPLDTRFLPFNPAAA 165
            ..|..::..|:.||....          |..|.|    |...|||  :.||.....|.....|  
  Fly   126 AGYAAAADPGNAAAAHHH----------HMTTLAAAAYLRGFLPPGFSTPHEFRGHFQQHFGA-- 178

  Fly   166 GVAPTDLSYRRLAELMNQDYVHSLS-----VHARLQHMAAAGR-------MHEDQANP---GMAQ 215
                   .:...|....|:|..||:     ..:..::.:::|.       ......||   |:..
  Fly   179 -------QFAEQAAARGQEYASSLANASGDEQSPSKNSSSSGNGGSGGSGSGSGGGNPTSNGLGH 236

  Fly   216 LQEPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFECSGDSCSDISLTMSPRNYNGEMDKSRNG-- 278
            |..||     :|...||.        ..|:......||.|.|:.|  .|....||....||:.  
  Fly   237 LGSPT-----ASNGGSGG--------GAGVGGSGGGSGTSGSNSS--TSGNGGNGGSSGSRSSPA 286

  Fly   279 ----------------------------------------------AYTNSDSEDCSDDEGAQSR 297
                                                          |:.::.:...:....|.:.
  Fly   287 GPHHSAALAAHQHAAAAAAAAHHHAAAAAAAHHAHHAHAQAHAHAHAHVHAHAAHAAHAAHAHAH 351

  Fly   298 H------EGGGMGGKDSQ--------------GNGSSSNSKSRRR--RTAFTSEQLLELEREFHA 340
            |      ..||.||..:.              |.|.....|::||  ||.|||.||.|||:.|..
  Fly   352 HAEAFLGAAGGAGGNPNSLLAAHGGDVLVGPGGTGPGGKKKNKRRHGRTIFTSSQLEELEKAFKE 416

  Fly   341 KKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRVK------AGLTSHGLGRNGTTSGTKI-- 397
            ..|..::.|..::....|:|.::::|:|||||||::.:      ..:..:||      .|..:  
  Fly   417 AHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKCWGHSTKMAEYGL------YGAMVRH 475

  Fly   398 VVPIPVHVNRFAVRSQHQQLEKMCLSGPKPDLRKKLSAEAIGGFEK-----FSGSTNASSPSG 455
            .:|:|..:.:.|  .:.:.:....|...|..|.   :||.:...|.     .|..||.|..:|
  Fly   476 SLPLPETIIKSA--KEDESVAPWLLGMHKKSLE---AAELLKSDESDRETPTSDDTNTSYSAG 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 21/50 (42%)
Vsx1NP_001284898.1 Homeobox 399..451 CDD:278475 22/51 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I3555
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.910

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