DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and nkx2.2a

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001295569.1 Gene:nkx2.2a / 30697 ZFINID:ZDB-GENE-980526-403 Length:273 Species:Danio rerio


Alignment Length:190 Identity:61/190 - (32%)
Similarity:83/190 - (43%) Gaps:35/190 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 GMDEDFECSGDSCSDISLTMSPRNYNGEMDKSRNGAYTNSD-----------------------S 285
            |.:||.|.|..:.:...|..||.. |.:....:|..|.|||                       |
Zfish    34 GTEEDTEGSEATKTPGVLVQSPLE-NVQNLPLKNPFYDNSDNPYTRWLATTDSIQYSLHGLSANS 97

  Fly   286 EDCSDDEGAQSRHEGGGMGGKDSQGNGSSSNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERS 350
            :|.|......|..|... ..|::..|||.| .|.|:||..|:..|..||||.|..::|||..||.
Zfish    98 QDTSAKSPEPSADESPD-NDKETSSNGSDS-GKKRKRRVLFSKAQTYELERRFRQQRYLSAPERE 160

  Fly   351 QIATSLKLSEVQVKIWFQNRRAKWKRVKAGLTSHGLGRNGTTSGTKIVVPI------PVH 404
            .:|:.::|:..||||||||.|.|.||.:|   ..|:......|..::.||:      |.|
Zfish   161 HLASLIRLTPTQVKIWFQNHRYKMKRARA---EKGMEVTHLPSPRRVAVPVLVRDGKPCH 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 24/50 (48%)
nkx2.2aNP_001295569.1 COG5576 93..218 CDD:227863 47/130 (36%)
Homeobox 132..185 CDD:278475 26/52 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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