DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and msx2b

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_571351.3 Gene:msx2b / 30531 ZFINID:ZDB-GENE-980526-492 Length:241 Species:Danio rerio


Alignment Length:304 Identity:78/304 - (25%)
Similarity:116/304 - (38%) Gaps:94/304 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 MAAAGRMHEDQANPGMAQLQEPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFECS---------- 252
            |:|:..:.|...:..|.|.:........|..:...||.         .::|||..          
Zfish     1 MSASASLKESDGDRDMEQRKTQVSSHPFSVESLISSHK---------TNKDFERRREDVSSQFAQ 56

  Fly   253 ---GDSCSDISLTMSPRNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQGNGSS 314
               .|||....:   |:::..:....::   .:.:.:||:          ...|..:.||....|
Zfish    57 TEIRDSCGSAGI---PKHFMLQTSPVKS---ESPEPDDCT----------SWVMNSRYSQTRQES 105

  Fly   315 -----SNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKW 374
                 .:..:|:.||.||:.|||.|||:|..|:|||:.||::.::||.|:|.||||||||||||.
Zfish   106 PCPLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLTLTETQVKIWFQNRRAKA 170

  Fly   375 KRVKAGLTSHGLGRNGTTSGTKIVVPIPVHVNRFAVRSQHQQLEKMCLSGPKPDLRKKLSAEAIG 439
            ||:                                   |..:|||:.|:. ||.|....|.....
Zfish   171 KRL-----------------------------------QEAELEKLKLTA-KPALHPNFSLPLPL 199

  Fly   440 GFEKFSGST--NASSP------SGGPVGLGVGVGVGVGVGLGVS 475
            |.:..|..:  ..|.|      ...||||       .|..||.|
Zfish   200 GTQLHSAVSLYGQSYPYQRPLLPVAPVGL-------YGTPLGYS 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 32/50 (64%)
msx2bNP_571351.3 Homeobox 118..171 CDD:278475 33/52 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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