DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and hoxd10a

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_571241.2 Gene:hoxd10a / 30404 ZFINID:ZDB-GENE-990415-116 Length:332 Species:Danio rerio


Alignment Length:398 Identity:92/398 - (23%)
Similarity:132/398 - (33%) Gaps:158/398 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PALLQNGEIGTMESPTTRLASKPFPKPFSIESLIANQTPATATPPSPPEERDQEQEAEQ------ 62
            |||.:.||:.......|            :.|.|    |.|.|...|......||...|      
Zfish    53 PALGKRGEVNHQNMDMT------------VHSYI----PQTDTWADPSRSCRLEQPLNQMSTCTF 101

  Fly    63 ----EQELSA------RAMVASSALGLTQFPLYNPWLHGYFAQNHERLTHLIAGGCYLPSSPAGH 117
                ::|.:.      ||.|:||     :.|.|               :.||...|.:.|     
Zfish   102 SQSIKEETNCCMYSDKRAKVSSS-----EIPAY---------------SSLIPESCSVDS----- 141

  Fly   118 PAAQQPQAQAQPQPPPPHPPTHALEKQLPPTLPHPLDTRFLPFNPAAAGVAPTDLSYRRL----A 178
                                         |.:|.|                    .|.||    |
Zfish   142 -----------------------------PEIPVP--------------------GYFRLSQTYA 157

  Fly   179 ELMNQDYVHSLSVHARLQHMAAAGRMHEDQANPGMAQLQEPTPPQAHSSPAKSGSHSPMEPALDV 243
            ...|.||.:...                 ..|..:.||...| |:|.|:|.       :|....:
Zfish   158 TAKNPDYDNETM-----------------SPNTTLMQLNRAT-PKAQSTPF-------VEVEKKL 197

  Fly   244 GMDEDFECSGDSCSDISLTMSPRNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDS 308
            ..|.|...|           ||.       :|.....:..:.::|| .|.:.|..|.....||:|
Zfish   198 AHDRDTRSS-----------SPA-------QSPEPKVSTLEEKNCS-TEASVSSPELPHREGKES 243

  Fly   309 QGNGSSSN---SKS-RRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQN 369
            :.:..:||   :|| |::|..:|..|.||||:||....||:...|.:|:.|:.|::.||||||||
Zfish   244 KNDTPTSNWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQN 308

  Fly   370 RRAKWKRV 377
            ||.|.|::
Zfish   309 RRMKLKKM 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 25/50 (50%)
hoxd10aNP_571241.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..261 19/85 (22%)
COG5576 204..>321 CDD:227863 44/132 (33%)
Homeobox 261..314 CDD:278475 26/52 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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