DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and hoxb1b

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_571217.2 Gene:hoxb1b / 30374 ZFINID:ZDB-GENE-980526-290 Length:307 Species:Danio rerio


Alignment Length:372 Identity:90/372 - (24%)
Similarity:117/372 - (31%) Gaps:152/372 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 YFAQNHERLTHLIAGGC------YLPSS--------PAGHP--------------AAQQPQAQAQ 128
            |...|....|:....||      ||||:        |.|.|              .....|.|:|
Zfish     7 YTIYNRGSNTYSSKVGCFPVEQEYLPSACASTNSYIPEGRPVGGNTFTSAPHETHGTSYAQIQSQ 71

  Fly   129 P-----------------QPPPPHPPTHALEKQLPPTLPHPLDTRFLPFNPAAAGVAPTDLSYRR 176
            |                 |..|||                                         
Zfish    72 PFHLNVDMGKTGHSNFCKQTRPPH----------------------------------------- 95

  Fly   177 LAELMNQDYVH-----SLSVHARLQ-------HMAA-AGRMHEDQANPGMAQLQEPTPPQAHSSP 228
                  .||.|     ....|.|||       :|.| .|...|....||          ...:|.
Zfish    96 ------SDYGHQHVLTQADDHMRLQSPGFSVVNMGANIGTYSESNCRPG----------SVSASH 144

  Fly   229 AKSGSHSPMEPALDVGMDEDFECSGDSCSDISLTMSPRNYNGEMDKSRNGAYTNSDSEDCSDDEG 293
            .:|.::...||. ..|....::.|.||.||....:........|...||...|...:|       
Zfish   145 YQSYAYGEPEPH-GYGSFSKYQVSPDSDSDSKTNIKQAPTFDWMKVKRNPPKTVKVAE------- 201

  Fly   294 AQSRHEGGGMGGKDSQGNGSSSNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKL 358
                   .|:.|:.:            ..||.||::||.|||:|||..|||:...|.::|.:|:|
Zfish   202 -------YGIHGQQN------------IIRTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLEL 247

  Fly   359 SEVQVKIWFQNRRAKW-KRVKAG---------LTSHGLGRNGTTSGT 395
            :|.||||||||||.|. ||.|.|         |.|.|...:.:||.:
Zfish   248 NETQVKIWFQNRRMKQKKREKEGTAPVIKRVTLCSSGQNADHSTSSS 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 30/51 (59%)
hoxb1bNP_571217.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..178 6/18 (33%)
Antp-type hexapeptide 183..188 0/4 (0%)
Homeobox 212..264 CDD:306543 31/51 (61%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 265..307 9/30 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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