DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and hoxb8a

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_005171620.1 Gene:hoxb8a / 30343 ZFINID:ZDB-GENE-990415-108 Length:246 Species:Danio rerio


Alignment Length:219 Identity:57/219 - (26%)
Similarity:85/219 - (38%) Gaps:80/219 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 CSGDSCSDISLTMSPRNYNGEMDKSRNGAYTNSDSE-----DCSDDEGAQSRHEGGGMGGKDSQG 310
            |.|:          |.|:.|.....|...:...|::     ||        :...||:|  |...
Zfish    79 CHGE----------PGNFYGYDALQRQTLFGAQDADLVQYSDC--------KLATGGIG--DETD 123

  Fly   311 NGSSSNSKS--------------RRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEV 361
            |...|.|.:              ||.|..::..|.||||:||....||:...|.:::.:|.|:|.
Zfish   124 NTEQSPSPTQLFPWMRPQVAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTER 188

  Fly   362 QVKIWFQNRRAKWKRVKAGLTSHGLGRNGTTSGTKIVVPIPVHVNRFAVRSQHQQLEKMCLSGPK 426
            ||||||||||.|||:                ...|...|        :.:|:.:|:||       
Zfish   189 QVKIWFQNRRMKWKK----------------ENNKDKFP--------SSKSEQEQIEK------- 222

  Fly   427 PDLRKKLSAEAIGGFEKFSGSTNA 450
             :.|:|         |:.||:.:|
Zfish   223 -EKREK---------EQASGTQSA 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 24/50 (48%)
hoxb8aXP_005171620.1 Homeobox 150..202 CDD:278475 25/51 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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