DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and hoxb3a

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_571192.2 Gene:hoxb3a / 30339 ZFINID:ZDB-GENE-990415-104 Length:417 Species:Danio rerio


Alignment Length:451 Identity:97/451 - (21%)
Similarity:150/451 - (33%) Gaps:172/451 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 PSPPEERDQEQEAEQEQELSARAMVASSALGLTQFPLYNPWLHGYFAQNHERLTHLIAGGCYLPS 112
            |:|..:.....|.:.:     |:..:..:||.:..|           |.....|..:.|.|..||
Zfish    29 PAPAFQNSAHLEGDYQ-----RSACSLQSLGTSAPP-----------QPQHAKTKELNGSCMRPS 77

  Fly   113 SPAGHPAAQQPQAQAQPQPPPPH-----PPTHALEKQLPPTLPHPLDTRFLPFNPAAAGVAPTDL 172
            .|        |:....||..||.     ..|:|.::               |......|||.:..
Zfish    78 LP--------PEHHPPPQVSPPQNTVNVAATNATQQ---------------PGGSGGGGVAGSGG 119

  Fly   173 SYRRLAELMNQDYVHSLSVHARLQHMAAAGRMHEDQANPGMAQLQEPTPPQAHSSPAKSGSHSPM 237
            :.:      :.....|::.:..|          ..|..|.|.:.::.| .|.:|||:.|.:::  
Zfish   120 TSK------SSSKSSSMATNPTL----------TKQIFPWMKESRQNT-KQKNSSPSASSANA-- 165

  Fly   238 EPALDVGMDEDFECSGDSCSDISLTMSPRNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGG 302
                        |.||                                                 
Zfish   166 ------------ESSG------------------------------------------------- 169

  Fly   303 MGGKDSQGNGSSSNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWF 367
             |.|...|:.:     |:|.|||:||.||:|||:|||..:||....|.::|..|.|||.|:||||
Zfish   170 -GEKSPPGSAA-----SKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWF 228

  Fly   368 QNRRAKWKRVKAGLTSHGLGRNGTTSGTKIVVPIPV---------------------------HV 405
            ||||.|:|:.:   .|.|:|.:..........|:|:                           |.
Zfish   229 QNRRMKYKKDQ---KSKGIGSSSGGPSPTGSPPLPMQSSAGFMNSMHSMGSYDAPSPPSFNKPHQ 290

  Fly   406 NRFAVRSQHQQLEKMCLSGPK-----PDLRKKLSAEAIGGFEKFSGSTNASSPSGGPVGLG 461
            |.:|:.:.:|...|.|....|     ||....       |.:..||:....:..|.||.:|
Zfish   291 NAYAMSTAYQNPMKGCPPQQKYGNTPPDYDPH-------GLQGNSGNYGTPNMQGSPVYVG 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 30/50 (60%)
hoxb3aNP_571192.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 51..135 22/123 (18%)
Antp-type hexapeptide 140..145 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 147..184 14/106 (13%)
Homeobox 184..236 CDD:278475 31/51 (61%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 237..290 5/55 (9%)
DUF4074 353..415 CDD:290032
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..417
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.900

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