DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and hoxb2a

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_571191.1 Gene:hoxb2a / 30338 ZFINID:ZDB-GENE-990415-103 Length:390 Species:Danio rerio


Alignment Length:206 Identity:63/206 - (30%)
Similarity:86/206 - (41%) Gaps:48/206 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 AAGRMHEDQANPGMAQLQEPTPPQAH-SSPAKSGSHSPMEPALDVGMDEDF----------ECSG 253
            |..|..:..|:.|:....:..||..| ..||.....:|:.        .:|          :|..
Zfish    62 ARPRSQKRTASNGLQLRTQTAPPTQHQQGPAPLSGGAPLA--------HEFPWMKEKKSSKKCPK 118

  Fly   254 DSCSDISLTMSPRNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQGNGSSSNSK 318
            ...:..:...||        ...:..||.:..|..::.:|                  |..:.|.
Zfish   119 PGATAAAAAASP--------SQASSGYTTAGLESPTEIQG------------------GLDNVSG 157

  Fly   319 SRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRVKAGLTS 383
            |||.|||:|:.||||||:|||..|||....|.:||..|.|:|.|||:||||||.|.||   ..|.
Zfish   158 SRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKR---QTTH 219

  Fly   384 HGLGRNGTTSG 394
            |..|:.|..||
Zfish   220 HRDGQEGEPSG 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 31/51 (61%)
hoxb2aNP_571191.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..73 3/10 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..100 5/18 (28%)
Antp-type hexapeptide 103..108 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..155 8/72 (11%)
Homeodomain 159..215 CDD:459649 34/55 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 211..338 9/23 (39%)
PRK11907 237..>320 CDD:237019
Blue background indicates that the domain is not in the aligned region.

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