DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unpg and Nkx1-1

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_234082.6 Gene:Nkx1-1 / 298981 RGDID:1564874 Length:443 Species:Rattus norvegicus


Alignment Length:451 Identity:120/451 - (26%)
Similarity:161/451 - (35%) Gaps:155/451 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 PSSPAGHPAAQQPQAQAQP--QPPPPHPPTHALE----KQLPPTLPH----PL---DTRFLPFNP 162
            |::|...||...|....:|  .|.||.|...|.:    :...|..|.    ||   ||  :|..|
  Rat     6 PAAPGDIPALPPPPPPPEPGSGPAPPAPAATARDAMDGRAELPIFPRAGVPPLAVSDT--VPAVP 68

  Fly   163 AAAGVA-------PTDLSYRRLAELMNQDYVHS------------------LSVHARLQHMAAAG 202
            ..||.|       ||..|   :.::::.:..:|                  .:..|.:...||:|
  Rat    69 DGAGAARPAAPPRPTSFS---VLDILDPNKFNSRRRRCVLLGPVVPATCAPCAPAACVPVPAASG 130

  Fly   203 RMHEDQ-------ANPGMAQL--QEPT-------PPQAHSSPAKSGS-HSPMEPALDVGMDED-F 249
            |....:       |..|:|..  .|||       ..:|.::...||| .||...:.|...:|| .
  Rat   131 RSPRAELERRALSAATGVAAATGAEPTSTGDSYRADEAEANGYSSGSGRSPTADSEDEAPEEDED 195

  Fly   250 ECSGDSCSDISLTMSPRNYNGEMDKSRNGAYTNSDSEDCSDDE--------------GAQSRHEG 300
            |.......|:..|..||..:|.:....:|....::.|....||              |......|
  Rat   196 EDQAPEVQDVQGTEEPRGGSGGLGARGSGCSGAAEVEASPVDEAAAPGPRGNSPGAPGPPVTAAG 260

  Fly   301 GGMGGKDSQG-----------NGSSSNS-KSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIA 353
            .|..|...||           .||.|.| |.||.|||||.|||:.||.:|.|.:|||:.||..:|
  Rat   261 AGNAGSTPQGAAVATKPKRKRTGSDSKSGKPRRARTAFTYEQLVALENKFKATRYLSVCERLNLA 325

  Fly   354 TSLKLSEVQVKIWFQNRRAKWKRVKAGLTSHGLGRNGTTSGTKIVVPIPVHVNRFAVRSQHQQLE 418
            .||.|:|.||||||||||.|||:...|                                      
  Rat   326 LSLSLTETQVKIWFQNRRTKWKKQNPG-------------------------------------- 352

  Fly   419 KMCLSGPKPDLRKKLSAEAIGGFEKFSGSTNASSPSGGPVGLGVGVGVGVGVGLGVSTPLS 479
                                         .:.|:|:||..|.|.|.|.|.|:..|:| |||
  Rat   353 -----------------------------ADTSAPTGGGGGPGPGAGPGAGLPGGLS-PLS 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 32/50 (64%)
Nkx1-1XP_234082.6 Homeobox 295..347 CDD:278475 33/51 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.