Protein Alignment unpg and Hoxd1

DIOPT Version :9

• Sequence 1: NP_477146.1
• Gene: unpg / 35942
• FlyBaseID: FBgn0015561
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: NP_001099354.1
• Gene: Hoxd1 / 288151
• RGDID: 1309179
• Length: 328
• Species: Rattus norvegicus
• Alignment Length: 318
• Identity: 85/318 - (26%)
• Similarity: 114/318 - (35%)
• Gaps: 87/318 - (27%)

  Fly   106 GGCYLPSSPA-----GHPAAQQPQ----------------AQAQPQPPPPHPPTHALEKQLPPTL 149
            ||..|..:|.     ..|.|.||.                |.|:|.|.||..|..      ||.
  Rat    20 GGDVLGFAPKFCRADARPVALQPAFPLGSGDGAFVSCLPLAAARPTPSPPVAPAQ------PPG- 77

  Fly   150 PHPLDTRFLPFNPAAA---GVAPTDLS-YRRLAELMNQDYVHSLS---------VHARLQHMAAA 201
            |.|..:|:.|.....|   |.||...: |..|......|:..:|.         ||.....:.::
  Rat    78 PQPAASRYAPCTLEGAYERGAAPASAAEYGFLGSGPAFDFPGALGRAADDSGPHVHYATSAVFSS 142

  Fly   202 GRMHEDQANPGMAQLQEPTP-PQAHSSPAKSGSHSPMEPALDVGMDEDFECSGDSCSDISLTMSP 265
            |...........|...||.| |.....|| .|...|.:                       |:||
  Rat   143 GGSFLLSGQVDFAAFAEPGPFPACLKEPA-DGHPGPFQ-----------------------TVSP 183

  Fly   266 RNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRH------EGGGMGGKDSQGNGSSSNSKSRRRRT 324
            .              ..:..:..|...|..:.|      :......|.|:.:...:.|.|...||
  Rat   184 A--------------PGACPKPASPTSGLPAAHSTFEWMKVKRNAPKKSKLSEYGATSPSSAIRT 234

  Fly   325 AFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKW-KRVKAGL 381
            .|:::||.|||:|||..|||:...|.:||..|:|::.||||||||||.|. ||.:.||
  Rat   235 NFSTKQLTELEKEFHFNKYLTRARRMEIANCLQLNDTQVKIWFQNRRMKQKKREREGL 292

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
unpg	NP_477146.1	Homeobox	324..375	CDD:278475	29/51 (57%)
Hoxd1	NP_001099354.1	COG5576	<208..325	CDD:227863	38/85 (45%)
		Homeobox	233..285	CDD:278475	30/51 (59%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.810