powered by:
Protein Alignment unpg and Hoxc6
DIOPT Version :9
Sequence 1: | NP_477146.1 |
Gene: | unpg / 35942 |
FlyBaseID: | FBgn0015561 |
Length: | 485 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038936324.1 |
Gene: | Hoxc6 / 252885 |
RGDID: | 620626 |
Length: | 243 |
Species: | Rattus norvegicus |
Alignment Length: | 157 |
Identity: | 48/157 - (30%) |
Similarity: | 67/157 - (42%) |
Gaps: | 41/157 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 270 GEMDKSRNGAYTNSD------------------SEDCSDDEG------------------AQSRH 298
|..|...|..|...| ::|.|.::| ..:.|
Rat 68 GPYDYGSNSFYQEKDMLSNCRQNTLGHNTQTSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSH 132
Fly 299 EGGGMGGKDSQGNGSSSNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQV 363
....:.|....|.|:. .||.|..::..|.||||:|||..:||:...|.:||.:|.|:|.|:
Rat 133 SVCFVPGSLGVGYGAD----RRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQI 193
Fly 364 KIWFQNRRAKWKRVKAGLTSHGLGRNG 390
||||||||.|||: ::.|||...|..|
Rat 194 KIWFQNRRMKWKK-ESNLTSTLSGGGG 219
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0489 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X14 |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.900 |
|
Return to query results.
Submit another query.