DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unpg and Dbx2

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_997416.2 Gene:Dbx2 / 223843 MGIID:107445 Length:377 Species:Mus musculus


Alignment Length:385 Identity:98/385 - (25%)
Similarity:129/385 - (33%) Gaps:151/385 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SKPFPKPFSIESLIANQTPATATP------------PSPPEERDQEQEAEQEQELSARA-----M 71
            |:..|:    |.|.|..:|.:..|            |..|.:|.:..   ....::|:|     :
Mouse    22 SRTLPE----EPLRAKDSPLSPDPVRALSLSLRTRSPRLPGQRARTM---LPSAVAAQAGAYWDV 79

  Fly    72 VASSALGLTQFPLYNPWLHGYFAQNH--ERLTHLIAGGCYLPSSPAGHPAAQQPQAQAQPQPP-- 132
            ||||||    |.|..|.. |...::.  |.|....||..:.|..|...|..:.||.:..|..|  
Mouse    80 VASSAL----FGLPAPGF-GSLGKSFLIENLLRAGAGPTHAPPPPRPAPGPECPQLRPLPASPVP 139

  Fly   133 ----PPHPPTHALEKQLPP-TLPHPLDTRFLPFNPAAAGVAPTDLSYRRLAELMNQDYVHSLSVH 192
                |..|.......|:|| ..|...|:.|.|..|.                             
Mouse   140 LKLCPAGPFGVRWAFQMPPGRAPGERDSAFQPSAPV----------------------------- 175

  Fly   193 ARLQHMAAAGRMHEDQANPGMAQLQEPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFECSGDSCS 257
                                      |:.|...|:|       |...|          |.|.|| 
Mouse   176 --------------------------PSKPFLLSAP-------PFYSA----------CCGGSC- 196

  Fly   258 DISLTMSPRNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGG-GMGGKDSQGNGSSSNSKSRR 321
                             .|..:.|            |.||.|.| .:..:|       ||||:||
Mouse   197 -----------------RRPASPT------------AFSREEHGLPLLTQD-------SNSKARR 225

  Fly   322 ---RRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRVK 378
               ||..|:.||...||:.|..:||:|.|:|.::|.||.|.|.||||||||||.||:..|
Mouse   226 GILRRAVFSEEQRKALEKMFQKQKYISKTDRRKLAVSLGLKESQVKIWFQNRRMKWRNSK 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 27/50 (54%)
Dbx2NP_997416.2 COG5576 <217..334 CDD:227863 38/76 (50%)
Homeobox 229..282 CDD:278475 29/52 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.