DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and Pdx1

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_032840.1 Gene:Pdx1 / 18609 MGIID:102851 Length:284 Species:Mus musculus


Alignment Length:423 Identity:99/423 - (23%)
Similarity:131/423 - (30%) Gaps:186/423 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 YFAQNHERLTHLIAGGCYLPSSPAGHPAAQQPQAQAQP--------QPPPPHPPTH-----ALEK 143
            |:|     .|.|....|.....|.       |:..|.|        |||||.||..     :||:
Mouse     7 YYA-----ATQLYKDPCAFQRGPV-------PEFSANPPACLYMGRQPPPPPPPQFTSSLGSLEQ 59

  Fly   144 QLPPTLPHPLDTRFLPFNPAAAGVAPTDLSYRRLAELMNQDYVHSLSVHARLQHMAAAGRMHEDQ 208
            ..||                       |:|...:..|.:.|              .|...:|...
Mouse    60 GSPP-----------------------DISPYEVPPLASDD--------------PAGAHLHHHL 87

  Fly   209 ANPGMAQLQEPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFECSGDSCSDISLT---MSPRNYNG 270
              |....|..|.|     .|..:|:    ||.   |::|.        :.:.|.   |.....:.
Mouse    88 --PAQLGLAHPPP-----GPFPNGT----EPG---GLEEP--------NRVQLPFPWMKSTKAHA 130

  Fly   271 EMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQGNGSSSNSKSRRRRTAFTSEQLLELE 335
            ...:...||||....|                                ::|.|||:|..||||||
Mouse   131 WKGQWAGGAYTAEPEE--------------------------------NKRTRTAYTRAQLLELE 163

  Fly   336 REFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRVKAGLTSHGLGRNG---------- 390
            :||...||:|...|.::|..|.|:|..:||||||||.|||:.:....|.|....|          
Mouse   164 KEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKEEDKKRSSGTPSGGGGGEEPEQDC 228

  Fly   391 -TTSGTKI--VVPIPVHVNRFAVRSQHQQLEKMCLSGPKPDLRKKLSAEAIGGFEKFSGSTNASS 452
             .|||.::  |.|:|                                                  
Mouse   229 AVTSGEELLAVPPLP-------------------------------------------------- 243

  Fly   453 PSGGPVGLGVGVGVGVGV---GLGVS-TPLSLA 481
            |.||.|..||...|..|:   ||.|| .|.|:|
Mouse   244 PPGGAVPPGVPAAVREGLLPSGLSVSPQPSSIA 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 28/50 (56%)
Pdx1NP_032840.1 Transactivation domain. /evidence=ECO:0000250 13..73 19/89 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..116 29/144 (20%)
Antp-type hexapeptide 119..124 0/4 (0%)
Homeobox 150..203 CDD:278475 29/52 (56%)
Nuclear localization signal 198..204 4/5 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 202..284 26/125 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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