DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unpg and NKX2-3

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_660328.2 Gene:NKX2-3 / 159296 HGNCID:7836 Length:364 Species:Homo sapiens


Alignment Length:406 Identity:96/406 - (23%)
Similarity:133/406 - (32%) Gaps:141/406 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 LPHPLDTRFLPFNPAAAGVAPTDLSYRRLAELMNQ-DYVHSLSVHARLQH--------MAAA--- 201
            ||.|              |..|..|.:.:..|..| .:.|...:.|.|:|        :|||   
Human     3 LPSP--------------VTSTPFSVKDILNLEQQHQHFHGAHLQADLEHHFHSAPCMLAAAEGT 53

  Fly   202 -----GRMHEDQANPGMAQLQEPTPPQAHSSPAKSG------SHSPMEPALDVGMDEDFECSGDS 255
                 |...|:.....::.|........|..   ||      .|:.:.               ||
Human    54 QFSDGGEEDEEDEGEKLSYLNSLAAADGHGD---SGLCPQGYVHTVLR---------------DS 100

  Fly   256 CSDISLTMSPRNYNGE----MDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQGNGSSSN 316
            ||:      |:.:..|    .|:|:.........|...|.:.|:               ......
Human   101 CSE------PKEHEEEPEVVRDRSQKSCQLKKSLETAGDCKAAE---------------ESERPK 144

  Fly   317 SKSRRR-RTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRVKAG 380
            .:|||: |..|:..|:.||||.|..::|||..||..:|:||||:..||||||||||.|.||.:..
Human   145 PRSRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNRRYKCKRQRQD 209

  Fly   381 ----LTSHG------------LGRNG----TTSGTKIVVPIPVHVNRFAVRSQHQQLEKMCLSGP 425
                |.:|.            |.|:|    |.|......|..|..:.::..           |.|
Human   210 KSLELGAHAPPPPPRRVAVPVLVRDGKPCVTPSAQAYGAPYSVGASAYSYN-----------SFP 263

  Fly   426 KPDLRKKLSAEAI------------------------GGFEKFSGSTNASSPSGGPVGLGVGVGV 466
            ........:|.|.                        ||....|.:|.|..|:....|.|..|.|
Human   264 AYGYGNSAAAAAAAAAAAAAAAAYSSSYGCAYPAGGGGGGGGTSAATTAMQPACSAAGGGPFVNV 328

  Fly   467 ----GVGVGLGVSTPL 478
                |.|.| |.:.||
Human   329 SNLGGFGSG-GSAQPL 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 28/50 (56%)
NKX2-3NP_660328.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 132..153 5/35 (14%)
HOX 148..204 CDD:197696 31/55 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.