DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unpg and Hoxd8

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_032302.2 Gene:Hoxd8 / 15437 MGIID:96209 Length:289 Species:Mus musculus


Alignment Length:329 Identity:83/329 - (25%)
Similarity:107/329 - (32%) Gaps:113/329 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 SARAMVASSALGLTQFPLYNPWLHGYFAQNHERLTHLIAGGCYLPSSPAG-HPAAQQPQAQAQPQ 130
            :|.|..|::|.|....|.|.                    .|:.....:| |.||.|....:...
Mouse    18 AAAAAAAAAAAGEAINPTYY--------------------DCHFAPEVSGRHAAALQLYGNSAAG 62

  Fly   131 PPPPHPPTHALEKQLPPTLPHPLDTRFLPFNPAAAGVAPTDLSYRRLAELMNQDYVHSLSVHARL 195
            .|..||..|          |||...   |......|..|            .|||.|        
Mouse    63 FPHAHPHPH----------PHPSPP---PGCGGGGGPGP------------GQDYFH-------- 94

  Fly   196 QHMAAAGRMHEDQANPGMAQLQEPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFECSGDSCSDIS 260
               |.||       :|..|....|.||.....|       |..|           |.|.:|..  
Mouse    95 ---AGAG-------SPTAAYQAAPPPPHPPPPP-------PPPP-----------CGGIACHG-- 129

  Fly   261 LTMSPRNYNGEMDKSRNGAYTNSDS------EDCSDDEGAQSRHEGGGMGGKDSQGNGSSSNSK- 318
               .|..:.|..:..|...:|....      .||        :...|.:|......|.|||.|: 
Mouse   130 ---EPAKFYGYDNLQRQPIFTTQQEAELVQYPDC--------KSSSGNIGEDPDHLNQSSSPSQM 183

  Fly   319 -----------SRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRA 372
                       .||.|..::..|.||||:||....||:...|.:::.:|.|:|.||||||||||.
Mouse   184 FPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHTLALTERQVKIWFQNRRM 248

  Fly   373 KWKR 376
            |||:
Mouse   249 KWKK 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 24/50 (48%)
Hoxd8NP_032302.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 62..125 26/123 (21%)
COG5576 139..272 CDD:227863 40/122 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 162..184 7/21 (33%)
Antp-type hexapeptide 183..188 0/4 (0%)
Homeobox 199..251 CDD:278475 25/51 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 252..289 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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