DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and Hoxd8

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_032302.2 Gene:Hoxd8 / 15437 MGIID:96209 Length:289 Species:Mus musculus


Alignment Length:329 Identity:83/329 - (25%)
Similarity:107/329 - (32%) Gaps:113/329 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 SARAMVASSALGLTQFPLYNPWLHGYFAQNHERLTHLIAGGCYLPSSPAG-HPAAQQPQAQAQPQ 130
            :|.|..|::|.|....|.|.                    .|:.....:| |.||.|....:...
Mouse    18 AAAAAAAAAAAGEAINPTYY--------------------DCHFAPEVSGRHAAALQLYGNSAAG 62

  Fly   131 PPPPHPPTHALEKQLPPTLPHPLDTRFLPFNPAAAGVAPTDLSYRRLAELMNQDYVHSLSVHARL 195
            .|..||..|          |||...   |......|..|            .|||.|        
Mouse    63 FPHAHPHPH----------PHPSPP---PGCGGGGGPGP------------GQDYFH-------- 94

  Fly   196 QHMAAAGRMHEDQANPGMAQLQEPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFECSGDSCSDIS 260
               |.||       :|..|....|.||.....|       |..|           |.|.:|..  
Mouse    95 ---AGAG-------SPTAAYQAAPPPPHPPPPP-------PPPP-----------CGGIACHG-- 129

  Fly   261 LTMSPRNYNGEMDKSRNGAYTNSDS------EDCSDDEGAQSRHEGGGMGGKDSQGNGSSSNSK- 318
               .|..:.|..:..|...:|....      .||        :...|.:|......|.|||.|: 
Mouse   130 ---EPAKFYGYDNLQRQPIFTTQQEAELVQYPDC--------KSSSGNIGEDPDHLNQSSSPSQM 183

  Fly   319 -----------SRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRA 372
                       .||.|..::..|.||||:||....||:...|.:::.:|.|:|.||||||||||.
Mouse   184 FPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHTLALTERQVKIWFQNRRM 248

  Fly   373 KWKR 376
            |||:
Mouse   249 KWKK 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 25/51 (49%)
Hoxd8NP_032302.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 62..125 26/123 (21%)
COG5576 139..272 CDD:227863 40/122 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 162..184 7/21 (33%)
Antp-type hexapeptide 183..188 0/4 (0%)
Homeodomain 196..252 CDD:459649 28/55 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 252..289 0/1 (0%)

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