DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and Hoxd12

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_032300.2 Gene:Hoxd12 / 15432 MGIID:96204 Length:268 Species:Mus musculus


Alignment Length:391 Identity:87/391 - (22%)
Similarity:133/391 - (34%) Gaps:155/391 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ALLQNGEIGT---MESPT-----------TRLASKPFPKPFSIESLIANQTPATATPPSPPEERD 55
            :|.:.|.:|:   ::||.           ::||:.| |..:...:|....|||:.||..|     
Mouse     5 SLYRAGYVGSLLNLQSPDSFYFSNLRANGSQLAALP-PISYPRSALPWATTPASCTPAQP----- 63

  Fly    56 QEQEAEQEQELSARAMVASSALGLTQFPLYNPWLHGYFAQNHERLTHLIAGGCYLPSSPAGHPAA 120
                           ..||:..|.:|     |:|.|                    |.|.|   .
Mouse    64 ---------------ATASAFGGFSQ-----PYLTG--------------------SGPIG---L 85

  Fly   121 QQPQAQAQPQPP----PPHPPTHALEKQLPPTLPHPLDTRFLPFNPAAAGVAPTDLSYRRLAELM 181
            |.|.|:..|:..    .|..||.:.|:.  .|.|        ||.|.::                
Mouse    86 QSPGAKDGPEDQVKFYTPDAPTASEERS--RTRP--------PFAPESS---------------- 124

  Fly   182 NQDYVHSLSVHARLQHMAAAGRMHEDQANPGMAQLQEPTPPQAHSSPAKSGSHSPMEPALDVGMD 246
               .|||.....:..: |..||     ..||.|.|.:..|                         
Mouse   125 ---LVHSALKGTKYDY-AGVGR-----TAPGSATLLQGAP------------------------- 155

  Fly   247 EDFECSGDSCSDISLTMSPRNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQGN 311
                |:.....|   |..|.|.|..:..:...:...|...|              |:....:.| 
Mouse   156 ----CASSFKED---TKGPLNLNMAVQVAGVASCLRSSLPD--------------GLPWGAAPG- 198

  Fly   312 GSSSNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKR 376
                  ::|::|..:|.:|:.|||.||...::::..:|.:::..|.||:.||||||||||.|.||
Mouse   199 ------RARKKRKPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKKR 257

  Fly   377 V 377
            |
Mouse   258 V 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 22/50 (44%)
Hoxd12NP_032300.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 102..124 9/31 (29%)
Homeobox 203..256 CDD:278475 23/52 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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