DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unpg and Hoxd10

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_006498852.1 Gene:Hoxd10 / 15430 MGIID:96202 Length:410 Species:Mus musculus


Alignment Length:397 Identity:92/397 - (23%)
Similarity:144/397 - (36%) Gaps:121/397 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SKPFPKPFSIESLIA-----NQTPATATPPSPPEERDQEQEAEQEQEL---SARAMVASSALGLT 80
            |.|....|.::|||:     :...::|:...||...|......|...|   .|:..|....:|:.
Mouse    76 SSPAANTFLVDSLISACRSDSFYSSSASMYMPPPSADMGTYGMQTCGLLPSLAKREVNHQNMGMN 140

  Fly    81 QFPLYNPWLHGYFAQN-----HERLTHLI-----------AGGCYLPSS------PAGHPAAQQ- 122
            ..| |.|.:..:...|     .:.:|..:           ...|.:.|.      .|..|:.|: 
Mouse   141 VHP-YIPQVDSWTDPNRSCRIEQPVTQQVPTCSFTANIKEESNCCMYSDKRNKLISAEVPSYQRL 204

  Fly   123 -PQAQAQPQPPPPHP------PTHALEK-QLPPTLPHPLDTRFLPFNPAAAGVAPTDLSYRRLAE 179
             |::.....|..|.|      .|:|..| |.....|....|..|..||..|.......:..::.:
Mouse   205 VPESCPVENPEVPVPGYFRLSQTYATGKTQEYNNSPEGSSTVMLQLNPRGAAKPQLSAAQLQMEK 269

  Fly   180 LMNQDYVHSLSVHARLQHMAAAGRMHEDQANPGMAQLQEPTPPQAHSSPAKSGSHSPMEPALDVG 244
            .||:               :|:|              ||||......||...|           |
Mouse   270 KMNE---------------SASG--------------QEPTKVSQVESPEAKG-----------G 294

  Fly   245 MDEDFECSGDSCSDISLTMSPRNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQ 309
            :.||..|    .:::|:: ||     |:.:..:.....||:                        
Mouse   295 LPEDRSC----LAEVSVS-SP-----EVQEKESKEEIKSDT------------------------ 325

  Fly   310 GNGSSSN---SKS-RRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNR 370
               .:||   :|| |::|..:|..|.||||:||....||:...|.:|:.|:.|::.|||||||||
Mouse   326 ---PTSNWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNR 387

  Fly   371 RAKWKRV 377
            |.|.|::
Mouse   388 RMKLKKM 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 25/50 (50%)
Hoxd10XP_006498852.1 Homeobox 339..393 CDD:365835 26/53 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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