DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unpg and Hoxa9

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001264167.1 Gene:Hoxa9 / 15405 MGIID:96180 Length:295 Species:Mus musculus


Alignment Length:305 Identity:76/305 - (24%)
Similarity:111/305 - (36%) Gaps:102/305 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 HERLTHLIAGGCYLPSSPAGHPAAQQPQAQAQPQPPPPHPPTHALEKQLPPTLPHPLDTRFLPFN 161
            ||..:.:|:.|   .:.||.....|.|       ||.|...|........|||.           
Mouse    61 HEICSFIISAG---RAGPARRGLLQWP-------PPGPWATTMWTPSCWAPTLL----------- 104

  Fly   162 PAAAGVAPTDLSYRRLAELMNQDYVHSLSVHARLQHMAAAGRMHEDQANP-GMAQL--QEPTPPQ 223
                      :|:.|.|.|..                        ...|| |..||  ..||...
Mouse   105 ----------MSWVRDATLQG------------------------PWVNPQGRRQLWPNTPTSVL 135

  Fly   224 AHSSPAK-----SGS----HSPMEPALDVGMDEDFECSGDSCSDISLTMSP--RNYNGEMDKSR- 276
            |.|||.:     .|:    .:||...|        :|...:.:...:...|  |.....:|:.: 
Mouse   136 AASSPRRRCLVPRGTQCTRRAPMRCLL--------QCIITTTTPTCIPRRPWRRRRRTAVDREKQ 192

  Fly   277 --NGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDS---QGNGSSSN----SKSRRRRTAFTSEQLL 332
              .||::.:::|           :|.||    |.   ..|..::|    ..:|::|..:|..|.|
Mouse   193 PSEGAFSENNAE-----------NESGG----DKPPIDPNNPAANWLHARSTRKKRCPYTKHQTL 242

  Fly   333 ELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRV 377
            |||:||....||:...|.::|..|.|:|.||||||||||.|.|::
Mouse   243 ELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKI 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 26/50 (52%)
Hoxa9NP_001264167.1 Hox9_act <190..216 CDD:282473 7/40 (18%)
Homeobox 232..285 CDD:278475 27/52 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.