DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and Hoxa4

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_032291.1 Gene:Hoxa4 / 15401 MGIID:96176 Length:285 Species:Mus musculus


Alignment Length:317 Identity:84/317 - (26%)
Similarity:121/317 - (38%) Gaps:101/317 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 LTQFPLYNPWLHGYFAQNHERLTHLIAGGCYLPSSPAGHPAAQQPQAQAQPQPPPPH----PPTH 139
            ::.|.:.:.::...|....|...|...||.  ..:..|.|...:||:......|.||    ||.:
Mouse     3 MSSFLINSNYIEPKFPPFEEFAPHGGPGGG--DGAVGGGPGYPRPQSAPHLPAPNPHAARQPPAY 65

  Fly   140 ALEKQLPPTLP---HPLDTRFLPFNPAAAGVAPTDLSYRRLAELMNQDYVHSLSVHARLQHMAAA 201
            ...:...|:.|   :|......|:  |..|.:|                       ||.:...|.
Mouse    66 YAPRAREPSYPGGLYPAPAAACPY--ACRGASP-----------------------ARPEQSPAP 105

  Fly   202 GRMHEDQANPGMAQLQEPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFECSGDSCSDISLTMSPR 266
            |      |:|..|. |.|.||: |.:|      .|..||:         .:|.|.....|.::  
Mouse   106 G------AHPSPAP-QPPAPPR-HCAP------GPTTPAV---------ATGGSAPACPLLLA-- 145

  Fly   267 NYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKD------------SQGNGSSSNSKS 319
                                    |:|.      .|..||:            |..|.|.:..:.
Mouse   146 ------------------------DQGP------AGPKGKEPVVYPWMKKIHVSAVNSSYNGGEP 180

  Fly   320 RRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKR 376
            :|.|||:|.:|:||||:|||..:||:...|.:||.:|.|||.||||||||||.|||:
Mouse   181 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 31/50 (62%)
Hoxa4NP_032291.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..70 13/52 (25%)
Antp-type hexapeptide 159..164 0/4 (0%)
Homeobox 183..236 CDD:278475 32/52 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 238..285 84/317 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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