DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unpg and Hoxa3

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_034582.1 Gene:Hoxa3 / 15400 MGIID:96175 Length:443 Species:Mus musculus


Alignment Length:452 Identity:108/452 - (23%)
Similarity:150/452 - (33%) Gaps:168/452 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 SARAMVASSALGLTQFPLYNP--WLHGYFAQNHERLTHLIAGGCYL-----PSSP--AGHPAAQQ 122
            |.:....|:|||......:.|  .|....:......||.::..|..     ||.|  .|.|....
Mouse    29 SQQPYAPSAALGTDGVEYHRPACSLQSPASAGGHPKTHELSEACLRTLSGPPSQPPGLGEPPLPP 93

  Fly   123 PQAQA-----QPQPPPPHPPTHALEKQLPPTLPHPLDTRFLPFNPAAAGVAPTDLSYRRLAELMN 182
            |..||     ||..|||.||........||:...|         |.:|...||..|..: :.|:|
Mouse    94 PPPQAAPPAPQPPQPPPQPPAPTPAAPPPPSSVSP---------PQSANSNPTPASTAK-SPLLN 148

  Fly   183 QDYVHSLSVHARLQHMAAAGRMHEDQANPGMAQLQEPTPPQAHSSPAKSGSHSPMEPALDVGMDE 247
            ...|               |:    |..|.|.:.::.|..:.      |||              
Mouse   149 SPTV---------------GK----QIFPWMKESRQNTKQKT------SGS-------------- 174

  Fly   248 DFECSGDSCSDISLTMSPRNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQGNG 312
               .||:||:                                              |.|...|..
Mouse   175 ---SSGESCA----------------------------------------------GDKSPPGQA 190

  Fly   313 SSSNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRV 377
            |     |:|.|||:||.||:|||:|||..:||....|.::|..|.|:|.|:||||||||.|:|:.
Mouse   191 S-----SKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKD 250

  Fly   378 KAG---LTSHGLGRNGTTSGTKIVVPIPVHVNRFAVRSQHQQLEKM------------------- 420
            :.|   |||.| |::.:.|      |:|.....: :.|.|..:..:                   
Mouse   251 QKGKGMLTSSG-GQSPSRS------PVPPGAGGY-LNSMHSLVNSVPYEPQSPPPFSKPPQGAYG 307

  Fly   421 ------------CLSGPKPDLRKKLSAEAIGGFEKF---------SGSTNASSPSGGPVGLG 461
                        |...|.|..|...:....||...:         :||.......|.||.:|
Mouse   308 LPPASYPAPLPSCAPPPPPQKRYTAAGSGAGGTPDYDPHAHGLQGNGSYGTPHLQGSPVFVG 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 29/50 (58%)
Hoxa3NP_034582.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 74..151 25/86 (29%)
Antp-type hexapeptide 156..161 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..197 14/107 (13%)
COG5576 <182..309 CDD:227863 48/139 (35%)
Homeobox 196..249 CDD:365835 30/52 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 248..354 18/113 (16%)
DUF4074 378..441 CDD:372548
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 401..443
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.