DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and Hoxa10

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_032289.2 Gene:Hoxa10 / 15395 MGIID:96171 Length:416 Species:Mus musculus


Alignment Length:311 Identity:78/311 - (25%)
Similarity:114/311 - (36%) Gaps:87/311 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 PAGHPAAQQPQAQAQPQPPPPHPPTHALEKQLPPTLPHPLDTRF------------------LPF 160
            |...|...|||.|.|.|.|||.||      |.|...|......|                  .|.
Mouse   130 PPDGPPPPQPQPQQQQQQPPPPPP------QPPQPQPQATSCSFAQNIKEESSYCLYDAADKCPK 188

  Fly   161 NPAAAGVAPTDL------------------SYRRLAELMNQDYVHSLSVHARLQHMAAAGRMHED 207
            ..|||.:||...                  .|.||::           .:...:...:.|...:.
Mouse   189 GSAAADLAPFPRGPPPDGCALGASSGVPVPGYFRLSQ-----------AYGTAKGFGSGGGGTQQ 242

  Fly   208 QANPGMAQLQ----EPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFECSGDSCSDISLTMSPRNY 268
            .|:|..||..    :|.|..|..|...:|.    |..||........|:|...|           
Mouse   243 LASPFPAQPPGRGFDPPPALASGSTEAAGK----ERVLDSTPPPTLVCTGGGGS----------- 292

  Fly   269 NGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQGNGSSSNS-------KSRRRRTAF 326
              :.|:..:.:.:.::....:..|.:::..|      |||.|:....|:       ..|::|..:
Mouse   293 --QGDEEAHASSSAAEELSPAPSENSKASPE------KDSLGSSKGENAANWLTAKSGRKKRCPY 349

  Fly   327 TSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRV 377
            |..|.||||:||....||:...|.:|:.|:.|::.||||||||||.|.|::
Mouse   350 TKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKM 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 25/50 (50%)
Hoxa10NP_032289.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..60
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..167 16/42 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 228..345 25/139 (18%)
Homeobox 345..398 CDD:278475 26/52 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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