DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unpg and Hlx

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_032276.1 Gene:Hlx / 15284 MGIID:96109 Length:476 Species:Mus musculus


Alignment Length:455 Identity:114/455 - (25%)
Similarity:170/455 - (37%) Gaps:117/455 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 SARAMVASSALGLTQFPLYNPWLHGYF---AQNHERLTHLIAGGCYLPSS-PAGHP-------AA 120
            :|..:|.:||.........:|  |..|   |::..|.|.::|     ||. |||.|       ||
Mouse    60 AAEGLVGASAALTAHLGSVHP--HASFQAAARSPLRPTPVVA-----PSEVPAGFPQRLSPLSAA 117

  Fly   121 -------QQPQAQAQPQPPPPHPPTHALEKQLPPTLPHPLDTRFLPFNPAAAGVAPT--DLSYRR 176
                   |.|..|.|||..|| ||..|:..| |||    ..||.:|.:..:| .||:  ||.:  
Mouse   118 FHQHLPQQSPTQQQQPQQQPP-PPPRAVSLQ-PPT----SGTRVVPHHSGSA-PAPSSKDLKF-- 173

  Fly   177 LAELMNQDYVHSLSVHARLQHMAAAGRMHEDQANPGMAQ---LQEPTPPQAHSSPAKSGSH-SPM 237
                                   ...|:...:.:|.:.:   |::.|.......||  |.| :.:
Mouse   174 -----------------------GIDRILSAEFDPKVKEGNTLRDLTSLLTGGRPA--GVHLAGL 213

  Fly   238 EPALDVGMDEDFECSGDSCSDISLTMSPRNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGG 302
            :|:..     .|..|.|..|:.|..:||.:.|     .||               ..|.:.:...
Mouse   214 QPSAG-----QFFASLDPISEASAILSPLSSN-----PRN---------------SVQHQFQDTF 253

  Fly   303 MGGKDSQGNGSSSNSKSRRR---RTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVK 364
            .|........:...:..|:|   |..|::.|...||:.|..:||::..:|.|:|..|.|::.|||
Mouse   254 PGPYAVLTKDTMPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVK 318

  Fly   365 IWFQNRRAKWKRVKAGLTSHGLGRNGTTSGTKIVVPIPVHVNR---------FAVRSQHQQLEKM 420
            :||||||.||:..|.........:.   :|.|....:|....|         ....|:....|.:
Mouse   319 VWFQNRRMKWRHSKEAQAQKDKDKE---AGEKPSGGVPAEGEREERSPSRSEGEAESESSDSESL 380

  Fly   421 CLS--------GPKPDLRKK--LSAEAIGGFEKFSGSTNASSPS-GGPVGLGVG-VGVGVGVGLG 473
            .::        |.:..|.:.  :.|.|.|.....|.||:.||.| .....||.| ..||....||
Mouse   381 DMAPSDTERTEGTERSLHQTTVIKASAAGALITASSSTSGSSFSFSSTSSLGSGNTHVGSASSLG 445

  Fly   474  473
            Mouse   446  445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 22/50 (44%)
HlxNP_032276.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..169 21/55 (38%)
COG5576 224..>341 CDD:227863 37/136 (27%)
Homeobox 276..329 CDD:278475 23/52 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 328..401 10/75 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 413..476 13/33 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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