DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and hoxa9

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_031760007.1 Gene:hoxa9 / 116411596 -ID:- Length:261 Species:Xenopus tropicalis


Alignment Length:264 Identity:71/264 - (26%)
Similarity:105/264 - (39%) Gaps:49/264 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 QPQPPP---PHPPTHALEKQLPPTLPHPLDTRFLPFNPAAAGVAPTDLSYRRLAELMNQDYVHSL 189
            ||:..|   ..||..|...:.|...|....::...|:      :|.:..:.:.|..::..|    
 Frog    25 QPRFAPGSLTQPPRQAASAEHPDFTPCSFQSKTSVFS------SPWNPLHPQTANNVSSVY---- 79

  Fly   190 SVHARLQHM----AAAGRMHEDQANPGMAQLQEPTP--PQAHSSPAKSGSHSPMEPALDVGMDED 248
              |..:.|.    |:.||......:| ||....|.|  |.:.|...|.   .|:.|.        
 Frog    80 --HPYMHHQPPISASDGRYMRSWLDP-MAAGSLPFPGFPSSRSYGIKP---EPVAPR-------- 130

  Fly   249 FECSGDSCSDISLTMSPRNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDS-QGNG 312
               .|| ||.......|      :.....|:.|:.|.: ..|...|.:..|....|.|.. ..|.
 Frog   131 ---RGD-CSTFDSRPLP------VSDYPCGSPTDRDKQ-IGDPPFAVTNGENPSNGEKPPIDPNN 184

  Fly   313 SSSN----SKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAK 373
            .::|    ..:|::|..:|..|.||||:||....||:...|.::|..|.|:|.||||||||||.|
 Frog   185 PAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMK 249

  Fly   374 WKRV 377
            .|::
 Frog   250 MKKI 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 26/50 (52%)
hoxa9XP_031760007.1 Hox9_act 1..182 CDD:398350 40/191 (21%)
Homeobox 198..252 CDD:395001 27/53 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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