DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and Gbx2

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_446160.1 Gene:Gbx2 / 114500 RGDID:621866 Length:348 Species:Rattus norvegicus


Alignment Length:429 Identity:147/429 - (34%)
Similarity:184/429 - (42%) Gaps:117/429 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PTTRLASKPF--PKPFSIESLIANQTPATATPPSPPEERDQEQEAEQEQELSARAMVASSALGLT 80
            |:..:..:|.  ...|||:|||       .:||.|                      :......|
  Rat     7 PSLMMMQRPLGSSTAFSIDSLI-------GSPPQP----------------------SPGHFVYT 42

  Fly    81 QFPLYNPWLHGYFAQNHERLTHLIAGGCYLPSSPAGHPAAQQPQAQAQPQPPPPHPPTHALEKQL 145
            .:|::.|:                                 :|.....|.||||..|..||:..|
  Rat    43 GYPMFMPY---------------------------------RPVVLPPPPPPPPALPQAALQPAL 74

  Fly   146 PPTLPH----PLDTRFLPFNPAAAGVAPTDLSYRRLAELMNQDYVHSLSVHARLQHM-AAAGRMH 205
            ||..||    .|.|.|.  :..|.|:|   |:...:|.|..       ...|..||. |||.|..
  Rat    75 PPAHPHHQIPSLPTGFC--SSLAQGMA---LTSTLMATLPG-------GFSASPQHQEAAAARKF 127

  Fly   206 EDQANPGMAQLQEPTPPQAHSSP-----AKSGSHSPMEPALDVGMDEDFECSGDSCSDISLTMSP 265
            ..|..||.....:....||.:..     ||.||......|..|.........|....:..:...|
  Rat   128 APQPLPGGGNFDKSEALQADTEDGKAFLAKEGSLLAFSAAEAVQASLVGAVRGQGKDESKVEDDP 192

  Fly   266 RNYNGEMDKSRNGAYTNSDSEDCSDDEG--AQSRH-------------EGGGMGGKDSQGNGSSS 315
                    |.:..:::.....|.|.|:.  .|:.|             :.||..|      .::|
  Rat   193 --------KGKEESFSLESDVDYSSDDNLPGQTAHKEEDPGHALEETPQSGGAAG------STTS 243

  Fly   316 NSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRVKAG 380
            ..|:||||||||||||||||:|||.|||||||||||||.:|||||||||||||||||||||||||
  Rat   244 TGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRVKAG 308

  Fly   381 LTSHGLGRNGTTSGTKIVVPIPVHVNRFAVRSQHQQLEK 419
            ..:...|.  .:...||||||||||:|||:||||||||:
  Rat   309 NANSKTGE--PSRNPKIVVPIPVHVSRFAIRSQHQQLEQ 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 46/50 (92%)
Gbx2NP_446160.1 Homeobox 250..304 CDD:395001 49/53 (92%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354181
Domainoid 1 1.000 108 1.000 Domainoid score I6303
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 176 1.000 Inparanoid score I3943
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003648
OrthoInspector 1 1.000 - - otm46247
orthoMCL 1 0.900 - - OOG6_106620
Panther 1 1.100 - - O PTHR24334
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X14
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.750

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