DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and Nkx2-5

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_446103.2 Gene:Nkx2-5 / 114109 RGDID:620520 Length:319 Species:Rattus norvegicus


Alignment Length:325 Identity:89/325 - (27%)
Similarity:127/325 - (39%) Gaps:99/325 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 PTLPH-PLDTR-FLPFNPAAAGVAPTDLSYRRLAELMNQDYVHSLSVHARLQHMAAAGRMHEDQA 209
            |.|.| |...: .|........:|..|||.|..|.|     ..:..:.|..:..|.:|   .:.|
  Rat     5 PALTHTPFSVKDILNLEQQQRSLAAGDLSARLEATL-----APASCMLAAFKPEAYSG---PEAA 61

  Fly   210 NPGMAQLQ-----EPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFECSGDSCSDISLTMSPRNYN 269
            .||:|:|:     .|:||:.  |||     .|..|                      |..||.| 
  Rat    62 APGLAELRAELGPAPSPPKC--SPA-----FPTAP----------------------TFYPRAY- 96

  Fly   270 GEMDKSRNGAYTNSDSED-CSDDEGAQSRHEGGGMGGKDSQGNGSSSNSKSRRR---RTAFTSEQ 330
            |:.|.:::   ..:|.:: |:..:..:          .|......:...::|||   |..|:..|
  Rat    97 GDPDPAKD---PRADKKELCALQKAVE----------LDKAETDGAERPRARRRRKPRVLFSQAQ 148

  Fly   331 LLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRVKAGLTSHGLGRNGTTSGT 395
            :.||||.|..::|||..||.|:|:.|||:..||||||||||.|.||.:...|...||        
  Rat   149 VYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQRQDQTLELLG-------- 205

  Fly   396 KIVVPIPVHVNRFAVRSQHQQLEKMCLSGPKPDLRKKLSAEAIGGFEKFSGSTNASSPSGGPVGL 460
                |.|....|.||        .:.:...||.|                |.:.|.:|:.| |||
  Rat   206 ----PPPPPARRIAV--------PVLVRDGKPCL----------------GDSAAYAPAYG-VGL 241

  Fly   461  460
              Rat   242  241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 28/50 (56%)
Nkx2-5NP_446103.2 Homeobox 144..194 CDD:395001 28/49 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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