powered by:
Protein Alignment unpg and Hoxc11
DIOPT Version :9
Sequence 1: | NP_477146.1 |
Gene: | unpg / 35942 |
FlyBaseID: | FBgn0015561 |
Length: | 485 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038934166.1 |
Gene: | Hoxc11 / 100911859 |
RGDID: | 6489991 |
Length: | 329 |
Species: | Rattus norvegicus |
Alignment Length: | 113 |
Identity: | 31/113 - (27%) |
Similarity: | 42/113 - (37%) |
Gaps: | 34/113 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 43 ATATPP-SPPEERDQEQEAEQEQELSARAMVASSALGLTQFPLYNPWLHGYFAQNHERLTHLIAG 106
|.|.|| |...|...|.||.....|::||.. |..|:..|..|:
Rat 165 APAEPPCSGKGEAKGEPEAPPASGLASRAEA------------------GAEAEAEEENTN---- 207
Fly 107 GCYLPSSP-AGHPAAQQPQAQAQPQPPPPHPPTHALEKQLPP-TLPHP 152
|||. :.|.|.::|...|.|...||:| ::.||. .:|.|
Rat 208 ----PSSSGSSHSATKEPAKGAAPSRRPPNP-----QEALPLFEIPDP 246
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
unpg | NP_477146.1 |
Homeobox |
324..375 |
CDD:278475 |
|
Hoxc11 | XP_038934166.1 |
DUF3528 |
42..178 |
CDD:403310 |
6/12 (50%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
1 |
1.000 |
- |
- |
|
X14 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
Return to query results.
Submit another query.