DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and hoxd9

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_012826755.2 Gene:hoxd9 / 100497640 XenbaseID:XB-GENE-485791 Length:278 Species:Xenopus tropicalis


Alignment Length:222 Identity:56/222 - (25%)
Similarity:91/222 - (40%) Gaps:32/222 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 HSLSVHARLQHMAAAGRMHEDQANPGMAQLQEPTPPQAH-----------------SSPAKSGSH 234
            ||.|..::......:....:.|...||..:..|...|:|                 ||.|.|.|.
 Frog    49 HSCSFASKSGVFPTSWTTVQPQPAAGMTGIYHPYVGQSHLAADSGRYTVRSWLDPISSAAPSFSG 113

  Fly   235 SPMEPALDVGMDEDFECSGDSCSDI---SLTMSPRNYNG-----EMDKSRNGAYTNSD--SEDCS 289
            .|.. ..:.|:..:.......||..   :||:.....|.     |...::..|..:.:  |.:..
 Frog   114 FPAN-GRNYGIKPESAAKRTECSSFGPQALTLPEYTCNSFPESTEKPPAKEPAAPSEEPNSTELK 177

  Fly   290 DDEGAQSRHEGGGMGGKDSQGNGSSSN----SKSRRRRTAFTSEQLLELEREFHAKKYLSLTERS 350
            :::..|.:.:......:....|..::|    ..:|::|..:|..|.||||:||....||:...|.
 Frog   178 EEKEQQQQQQQQQQQQQQLDPNNPAANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRY 242

  Fly   351 QIATSLKLSEVQVKIWFQNRRAKWKRV 377
            ::|..|.|:|.||||||||||.|.|::
 Frog   243 EVARILNLTERQVKIWFQNRRMKMKKM 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 26/50 (52%)
hoxd9XP_012826755.2 Hox9_act 1..181 CDD:398350 24/132 (18%)
HOX 211..260 CDD:197696 22/48 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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