DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and hoxc5

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_002936695.2 Gene:hoxc5 / 100487879 XenbaseID:XB-GENE-485672 Length:225 Species:Xenopus tropicalis


Alignment Length:173 Identity:55/173 - (31%)
Similarity:78/173 - (45%) Gaps:31/173 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 SPAKSGSHSPMEPALDVGMDEDFECSGDSCSDISLTMSPRNY---NGEMDKSRNGAYTNSDSEDC 288
            ||..|.|.|    |||:..:.:......||:    .|....:   .||.....:|.|....:...
 Frog    51 SPGSSNSLS----ALDMPSNPNANSERPSCT----VMGSSGHTVGRGEQSALNSGIYNQKAATTS 107

  Fly   289 SDD----------EGAQSRHEGGGMGGKDSQGNGS----------SSNSKSRRRRTAFTSEQLLE 333
            .::          |.|||..:||....:..|....          |..:..:|.||::|..|.||
 Frog   108 LEERSKGIESIKTEPAQSTPQGGQPQQQQQQQPPQIYPWMTKLHMSHETDGKRSRTSYTRYQTLE 172

  Fly   334 LEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKR 376
            ||:|||..:||:...|.:||.:|.|:|.|:||||||||.|||:
 Frog   173 LEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKK 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 28/50 (56%)
hoxc5XP_002936695.2 Homeobox 161..215 CDD:395001 30/53 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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