DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unpg and gbx2.1

DIOPT Version :9

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_002932046.1 Gene:gbx2.1 / 100485559 XenbaseID:XB-GENE-855771 Length:340 Species:Xenopus tropicalis


Alignment Length:426 Identity:142/426 - (33%)
Similarity:183/426 - (42%) Gaps:119/426 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PTTRLASKPF--PKPFSIESLIANQTPATATPPSPPEERDQEQEAEQEQELSARAMVASSALGLT 80
            |...:..:|.  ...|||:|||       .:||.|                      :......|
 Frog     7 PPLMMMQRPLGSSTAFSIDSLI-------GSPPQP----------------------SPGHFVYT 42

  Fly    81 QFPLYNPWLHGYFAQNHERLTHLIAGGCYLPSSPAGHPAAQQPQAQAQPQPPPPHPPTHALEKQL 145
            .:|::.|:                            .|..         .||||.||....:..|
 Frog    43 GYPMFMPY----------------------------RPVV---------LPPPPPPPPSLSQATL 70

  Fly   146 PPTLPHPLDTRFLPFNPA------AAGVAPTDLSYRRLAELMNQDYVHSLSVHARLQHMAAAGRM 204
            .||||.......:|..|:      |.|:|.|.                  ::.|.|....:|...
 Frog    71 QPTLPSAHPHHQIPSLPSGFCSSLAQGMALTS------------------TLMATLPGGFSASAQ 117

  Fly   205 HEDQANP-GMAQLQEPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFECSGDSCSDISLTMSPRNY 268
            |::.|.. |...||       .:.....|..|..|......:.::......|.|::||  .|...
 Frog   118 HQEAARKFGAQSLQ-------GAFEKSDGGQSDGEDGNKTYITKEGTLLPFSASEVSL--GPVRG 173

  Fly   269 NGEMD-------KSRNGAY-TNSDSEDCSDDE-GAQSRH------EGGGMGGKDSQGNGSSSNSK 318
            .|:.:       |.:..:| .:||.:..|||. ..|:.|      |........|..:.:||..|
 Frog   174 QGKEESGKEAEGKGKEDSYLMDSDLDYSSDDNISCQTAHKEDDTPEESPPNSNPSNNSNTSSTGK 238

  Fly   319 SRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRVKAGLTS 383
            :||||||||||||||||:|||.|||||||||||||.:|||||||||||||||||||||||||..:
 Frog   239 NRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRVKAGNAN 303

  Fly   384 HGLGRNGTTSGTKIVVPIPVHVNRFAVRSQHQQLEK 419
            ...|.  .:...||||||||||:|||:||||||||:
 Frog   304 SKTGE--PSRNPKIVVPIPVHVSRFAIRSQHQQLEQ 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeobox 324..375 CDD:278475 46/50 (92%)
gbx2.1XP_002932046.1 Homeobox 242..296 CDD:365835 49/53 (92%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 108 1.000 Domainoid score I6337
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 177 1.000 Inparanoid score I3928
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003648
OrthoInspector 1 1.000 - - otm49330
Panther 1 1.100 - - O PTHR24334
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4817
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.090

Return to query results.
Submit another query.