DRSC/TRiP Functional Genomics Resources

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Protein Alignment unpg and hoxb5

DIOPT Version :10

Sequence 1:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001094494.1 Gene:hoxb5 / 100113366 XenbaseID:XB-GENE-1005991 Length:258 Species:Xenopus tropicalis


Alignment Length:232 Identity:72/232 - (31%)
Similarity:94/232 - (40%) Gaps:54/232 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 SYRRLAELMNQD-YVHSLS-VHARLQHMAAAGRMHEDQANPGM---------AQLQEPTP-PQAH 225
            |||..|..|... |.::.: :...:...||:...:.|.|.||.         ..|..|.| |.|.
 Frog    35 SYREAAGSMQPSAYGYNYNGMDLSVSRAAASSSHYGDSAFPGQESRFRANQSCPLATPDPLPCAK 99

  Fly   226 SSPAKSGSHSPMEPALDVGMDEDF----ECSGDSCSDISLTMSPRNYNGEMDKSRNGAYTNSDSE 286
            |   .....||.:||...|....|    |.|..|.::.|.|  ||:                   
 Frog   100 S---HKDELSPTDPATSAGSSAQFTEVEETSASSETEESST--PRS------------------- 140

  Fly   287 DCSDDEGAQSRHEGGGMGGKDSQG------------NGSSSNSKSRRRRTAFTSEQLLELEREFH 339
              |....|...:...|..|.|.|.            |...:....:|.|||:|..|.||||:|||
 Frog   141 --SAPPRALQENSSPGAAGTDGQNPQIFPWMRKLHINHDMTGPDGKRARTAYTRYQTLELEKEFH 203

  Fly   340 AKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKR 376
            ..:||:...|.:||.:|.|||.|:||||||||.|||:
 Frog   204 FNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 31/51 (61%)
hoxb5NP_001094494.1 Homeodomain 184..240 CDD:459649 33/55 (60%)

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